Reducing data dimensions for systems engineering and risk management of transportation corridors. - James H. Lambert; Junrui Xu; Michelle C. Hamilton; Yue Bi; Daniel K. Codeluppi; Nelson K. Fu; Cherie R. Magennis; Akira A. Powell; Samuel D. Sisto (SMC, 2014)

Estimating Web Attack Detection via Model Uncertainty from Inaccurate Annotation. - Xinyu Gong; Yuefu Zhou; Yue Bi; Mingcheng He; Shiying Sheng; Han Qiu 001; Ruan He; Jialiang Lu (CSCloud/EdgeCom, 2019)

Evolutionary Anti-Jamming Game in Non-Orthogonal Multiple Access System. - Yue Bi; Yue Wu 010; Cunqing Hua; Futai Zou (GLOBECOM, 2019)

Deep Reinforcement Learning Based Multi-User Anti-Jamming Strategy. - Yue Bi; Yue Wu 010; Cunqing Hua (ICC, 2019)

EnsemPseU: Identifying Pseudouridine Sites With an Ensemble Approach. - Yue Bi; Dong Jin; Cangzhi Jia (IEEE Access, 2020)

PASSION: an ensemble neural network approach for identifying the binding sites of RBPs on circRNAs. - Cangzhi Jia; Yue Bi; Jinxiang Chen; André Leier; Fuyi Li; Jiangning Song (Bioinform., 2020)

DoF of a Cooperative X-Channel with an Application to Distributed Computing. - Yue Bi; Philippe Ciblat; Michèle A. Wigger; Yue Wu 010 (ISIT, 2022)

Clarion is a multi-label problem transformation method for identifying mRNA subcellular localizations. - Yue Bi; Fuyi Li; Xudong Guo; Zhikang Wang; Tong Pan; Yuming Guo 001; Geoffrey I. Webb; Jianhua Yao 001; Cangzhi Jia; Jiangning Song (Briefings Bioinform., 2022)

Multiplex-detection Based Multiple Instance Learning Network for Whole Slide Image Classification. - Zhikang Wang; Yue Bi; Tong Pan; Xiaoyu Wang 016; Chris Bain; Richard Bassed; Seiya Imoto; Jianhua Yao 001; Jiangning Song (CoRR, 2022)

Bounds on the Wireless MapReduce NDT-Computation Tradeoff. - Yue Bi; Michèle A. Wigger (CoRR, 2022)

A New Interference-Alignment Scheme for Wireless MapReduce. - Yue Bi; Michèle A. Wigger; Yue Wu 010 (GLOBECOM, 2023)

PFresGO: an attention mechanism-based deep-learning approach for protein annotation by integrating gene ontology inter-relationships. - Tong Pan; Chen Li 021; Yue Bi; Zhikang Wang; Robin B. Gasser; Anthony W. Purcell; Tatsuya Akutsu; Geoffrey I. Webb; Seiya Imoto; Jiangning Song (Bioinform., 2023)

Targeting tumor heterogeneity: multiplex-detection-based multiple instance learning for whole slide image classification. - Zhikang Wang; Yue Bi; Tong Pan; Xiaoyu Wang 016; Chris Bain; Richard Bassed; Seiya Imoto; Jianhua Yao 001; Roger J. Daly; Jiangning Song (Bioinform., 2023)

ATTIC is an integrated approach for predicting A-to-I RNA editing sites in three species. - Ruyi Chen; Fuyi Li; Xudong Guo; Yue Bi; Chen Li 021; Shirui Pan; Lachlan J. M. Coin; Jiangning Song (Briefings Bioinform., 2023)

Digerati - A multipath parallel hybrid deep learning framework for the identification of mycobacterial PE/PPE proteins. - Fuyi Li; Xudong Guo; Yue Bi; Runchang Jia; Miranda E. Pitt; Shirui Pan; Shuqin Li; Robin B. Gasser; Lachlan J. M. Coin; Jiangning Song (Comput. Biol. Medicine, 2023)

DoF Analysis for (M, N)-Channels through a Number-Filling Puzzle. - Yue Bi; Yue Wu 010; Cunqing Hua (ISIT, 2024)

scDFN: enhancing single-cell RNA-seq clustering with deep fusion networks. - Tianxiang Liu; Cangzhi Jia; Yue Bi; Xudong Guo; Quan Zou 001; Fuyi Li (Briefings Bioinform., 2024)

A two-task predictor for discovering phase separation proteins and their undergoing mechanism. - Yetong Zhou; Shengming Zhou; Yue Bi; Quan Zou 001; Cangzhi Jia (Briefings Bioinform., 2024)

MSlocPRED: deep transfer learning-based identification of multi-label mRNA subcellular localization. - Yun Zuo 001; Bangyi Zhang; Wenying He; Yue Bi; Xiangrong Liu; Xiangxiang Zeng; Zhaohong Deng (Briefings Bioinform., 2024)

ILYCROsite: Identification of lysine crotonylation sites based on FCM-GRNN undersampling technique. - Yun Zuo 001; Minquan Wan; Yang Shen; Xinheng Wang; Wenying He; Yue Bi; Xiangrong Liu; Zhaohong Deng (Comput. Biol. Chem., 2024)

Glypred: Lysine Glycation Site Prediction via CCU-LightGBM-BiLSTM Framework with Multi-Head Attention Mechanism. - Yun Zuo 001; Bangyi Zhang; Yinkang Dong; Wenying He; Yue Bi; Xiangrong Liu; Xiangxiang Zeng; Zhaohong Deng (J. Chem. Inf. Model., 2024)

Normalized Delivery Time of Wireless MapReduce. - Yue Bi; Michèle A. Wigger; Yue Wu 010 (IEEE Trans. Inf. Theory, 2024)

Coded Computing for Half-Duplex Wireless Distributed Computing Systems via Interference Alignment. - Zhenhao Huang; Kai Yuan; Shuai Ma 002; Yue Bi; Youlong Wu (IEEE Trans. Wirel. Commun., 2024)

Multi-bit Quantizer Design for Distributed Parameter Estimation. - Yue Bi; Philippe Ciblat; Yue Wu 010; Cunqing Hua (SSP, 2025)

Stochastic Activation based Broadcast Push-Sum for Distributed Estimation. - Yue Bi; Philippe Ciblat; Yue Wu 010; Cunqing Hua (SSP, 2025)

SCREEN: A Graph-based Contrastive Learning Tool to Infer Catalytic Residues and Assess Enzyme Mutations. - Tong Pan; Yue Bi; Xiaoyu Wang 016; Ying Zhang 053; Geoffrey I. Webb; Robin B. Gasser; Lukasz A. Kurgan; Jiangning Song (Genom. Proteom. Bioinform., 2025)

Fundamental limits and practical algorithms for wireless distributed computation and estimation systems. (Limites fondamentales et algorithmes pratiques pour les systèmes de calcul et d'estimation distribués sans fil). - Yue Bi (2025)

More Is Better: A MoE-Based Emotion Recognition Framework with Human Preference Alignment. - Jun Xie 003; Yingjian Zhu; Feng Chen 044; Zhenghao Zhang; Xiaohui Fan; Hongzhu Yi; Xinming Wang; Chen Yu; Yue Bi; Zhaoran Zhao; Xiongjun Guan; Zhepeng Wang 002 (CoRR, 2025)