% csauthors.net - beta - BibTeX bibliography of Yue Joseph Wang
@inproceedings{conf/icip/AdaliW94,
title = {Probabilistic Neural Networks for Medical Image Quantification.},
year = {1994},
booktitle = {ICIP (3)},
author = {{Tülay Adali} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {Proceedings 1994 International Conference on Image Processing, Austin, Texas, USA, November 13-16, 1994}
}
@inproceedings{conf/icip/XuanAW95,
title = {Segmentation of magnetic resonance brain image: integrating region growing and edge detection.},
year = {1995},
booktitle = {ICIP (3)},
author = {{Jianhua Xuan} and {Tülay Adali} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {Proceedings 1995 International Conference on Image Processing, Washington, DC, USA, October 23-26, 1995}
}
@inproceedings{conf/eusipco/XuanASW96,
title = {Image quality evaluation for radiation dose optimization in CR by shape and wavelet analyses.},
year = {1996},
booktitle = {EUSIPCO},
author = {{Jianhua Xuan} and {Tiilay Adah} and {Eliot L. Siegel} and {Yue Wang 021}},
publisher = {IEEE},
booktitle = {8th European Signal Processing Conference, EUSIPCO 1996, Trieste, Italy, 10-13 September, 1996}
}
@inproceedings{conf/icassp/WangA96,
title = {Efficient learning of standard finite normal mixtures for image quantification.},
year = {1996},
booktitle = {ICASSP},
author = {{Yue Joseph Wang} and {Tülay Adali}},
publisher = {IEEE Computer Society},
booktitle = {1996 IEEE International Conference on Acoustics, Speech, and Signal Processing Conference Proceedings, ICASSP '96, Atlanta, Georgia, USA, May 7-10, 1996}
}
@inproceedings{conf/icip/LiLLW97,
title = {Stochastic Model and Probabilistic Decision-Based Calssifier for Mass Detection in Digital Mammography.},
year = {1997},
booktitle = {ICIP (3)},
author = {{Huai Li} and {K. J. Ray Liu} and {Shih-Chung Ben Lo} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {Proceedings 1997 International Conference on Image Processing, ICIP '97, Santa Barbara, California, USA, October 26-29, 1997}
}
@inproceedings{conf/icip/WangLXLM97,
title = {Modeling of Wavelet Coefficients in Medical Image Compression.},
year = {1997},
booktitle = {ICIP (1)},
author = {{Yue Joseph Wang} and {Huao Li} and {Jianhua Xuan} and {Shih-Chung Ben Lo} and {Seong Ki Mun}},
publisher = {IEEE Computer Society},
booktitle = {Proceedings 1997 International Conference on Image Processing, ICIP '97, Santa Barbara, California, USA, October 26-29, 1997}
}
@inproceedings{conf/icip/XuanWAZ97,
title = {A Deformable Surface-Spine Model for 3-D Surface Registration.},
year = {1997},
booktitle = {ICIP (3)},
author = {{Jianhua Xuan} and {Yue Joseph Wang} and {Tülay Adali} and {Qinfen Zheng}},
publisher = {IEEE Computer Society},
booktitle = {Proceedings 1997 International Conference on Image Processing, ICIP '97, Santa Barbara, California, USA, October 26-29, 1997}
}
@inproceedings{conf/icra/0002WFM97,
title = {Color-feature-based finger tracking for breast palpation quantification.},
year = {1997},
booktitle = {ICRA},
author = {{Jianchao Zeng 002} and {Yue Joseph Wang} and {Matthew T. Freedman} and {Seong Ki Mun}},
publisher = {IEEE},
booktitle = {Proceedings of the 1997 IEEE International Conference on Robotics and Automation, Albuquerque, New Mexico, USA, April 20-25, 1997}
}
@inproceedings{conf/miip/0002WFM97,
title = {Stereo-vision system for finger tracking in breast self-examination.},
year = {1997},
booktitle = {Medical Imaging: Image Processing},
author = {{Jianchao Zeng 002} and {Yue Joseph Wang} and {Matthew T. Freedman} and {Seong Ki Mun}},
publisher = {SPIE},
booktitle = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States, 22-28 February 1997}
}
@inproceedings{conf/miip/LoXLWFM97,
title = {Dyadic decomposition: a unified perspective on predictive, subband, and wavelet transforms.},
year = {1997},
booktitle = {Medical Imaging: Image Processing},
author = {{Shih-Chung Benedict Lo} and {Jianhua Xuan} and {Huai Li} and {Yue Joseph Wang} and {Matthew T. Freedman} and {Seong Ki Mun}},
publisher = {SPIE},
booktitle = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States, 22-28 February 1997}
}
@inproceedings{conf/miip/WangXSHELM97,
title = {Statistical modeling and visualization of localized prostate cancer.},
year = {1997},
booktitle = {Medical Imaging: Image Processing},
author = {{Yue Joseph Wang} and {Jianhua Xuan} and {Isabell A. Sesterhenn} and {Wendelin S. Hayes} and {David S. Ebert} and {John H. Lynch} and {Seong Ki Mun}},
publisher = {SPIE},
booktitle = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States, 22-28 February 1997}
}
@inproceedings{conf/miip/XuanSHWAYFM97,
title = {Surface reconstruction and visualization of the surgical prostate model.},
year = {1997},
booktitle = {Medical Imaging: Image Processing},
author = {{Jianhua Xuan} and {Isabell A. Sesterhenn} and {Wendelin S. Hayes} and {Yue Joseph Wang} and {Tülay Adali} and {Yukako Yagi} and {Matthew T. Freedman} and {Seong Ki Mun}},
publisher = {SPIE},
booktitle = {Medical Imaging 1997: Image Display, Newport Beach, CA, United States, 22-28 February 1997}
}
@inproceedings{conf/miccai/XuanWSMM98,
title = {3-D Model Supported Prostrate Biopsy Simulation and Evaluation.},
year = {1998},
booktitle = {MICCAI},
author = {{Jianhua Xuan} and {Yue Joseph Wang} and {Isabell A. Sesterhenn} and {Judd W. Moul} and {Seong Ki Mun}},
publisher = {Springer},
booktitle = {Medical Image Computing and Computer-Assisted Intervention - MICCAI'98, First International Conference, Cambridge, MA, USA, October 11-13, 1998, Proceedings}
}
@inproceedings{conf/miip/LoLHWFM98,
title = {Detection of mammographic masses using sector features with a multiple-circular-path neural network.},
year = {1998},
booktitle = {Medical Imaging: Image Processing},
author = {{Shih-Chung Benedict Lo} and {Huai Li} and {Akira Hasegawa} and {Yue Joseph Wang} and {Matthew T. Freedman} and {Seong Ki Mun}},
publisher = {SPIE},
booktitle = {Medical Imaging 1998: Image Processing, San Diego, CA, United States, 21-26 February 1998}
}
@article{journals/imst/AdaliWG98,
title = {A blockwise relaxation labeling scheme and its application to edge detection in cardiac MR image sequences.},
year = {1998},
journal = {Int. J. Imaging Syst. Technol.},
author = {{Tülay Adali} and {Yue Joseph Wang} and {Nidhi Gupta}}
}
@article{journals/tip/WangAKS98,
title = {Quantification and segmentation of brain tissues from MR images: a probabilistic neural network approach.},
year = {1998},
journal = {IEEE Trans. Image Process.},
author = {{Yue Joseph Wang} and {Tülay Adali} and {Sun-Yuan Kung} and {Zsolt Szabo}}
}
@article{journals/tsp/WangLLK98,
title = {Data mapping by probabilistic modular networks and information-theoretic criteria.},
year = {1998},
journal = {IEEE Trans. Signal Process.},
author = {{Yue Joseph Wang} and {Shang-Hung Lin} and {Huai Li} and {Sun-Yuan Kung}}
}
@article{journals/vlsisp/WangALK98,
title = {Quantitative Analysis of MR Brain Image Sequences by Adaptive Self-Organizing Finite Mixtures.},
year = {1998},
journal = {J. VLSI Signal Process.},
author = {{Yue Joseph Wang} and {Tülay Adali} and {Chi-Ming Lau} and {Sun-Yuan Kung}}
}
@inproceedings{conf/icra/WangNSGF99,
title = {Tactile Mapping of Palpable Abnormalities for Breast Cancer Diagnosis.},
year = {1999},
booktitle = {ICRA},
author = {{Yue Joseph Wang} and {C. Nguyen} and {Rujirutana Srikanchana} and {Z. Geng} and {Matthew T. Freedman}},
publisher = {IEEE Robotics and Automation Society},
booktitle = {1999 IEEE International Conference on Robotics and Automation, Marriott Hotel, Renaissance Center, Detroit, Michigan, USA, May 10-15, 1999, Proceedings}
}
@inproceedings{conf/ijcnn/WangLFK99,
title = {Hierarchical probabilistic principal component subspaces for data visualization.},
year = {1999},
booktitle = {IJCNN},
author = {{Yue Joseph Wang} and {Lan Luo} and {Matthew T. Freedman} and {Sun-Yuan Kung}},
publisher = {IEEE},
booktitle = {International Joint Conference Neural Networks, IJCNN 1999, Washington, DC, USA, July 10-16, 1999}
}
@inproceedings{conf/aipr/WoodsWFC00,
title = {Model Supported Image Registration and Warping for Change Detection in Computer-aided Diagnosis.},
year = {2000},
booktitle = {AIPR},
author = {{Kelvin Woods} and {Yue Joseph Wang} and {Li Fan} and {Chang Wen Chen}},
publisher = {IEEE Computer Society},
booktitle = {29th Applied Image Pattern Recognition Workshop (AIPR 2000), 16-18 October 2000, Washington, DC, USA, Proceedings}
}
@inproceedings{conf/miip/WangWLLF00,
title = {Computer-based decision support system: visual mapping of featured database in computer-aided diagnosis.},
year = {2000},
booktitle = {Medical Imaging: Image Processing},
author = {{Yue Joseph Wang} and {Zuyi Wang} and {Lan Luo} and {Shih-Chung Benedict Lo} and {Matthew T. Freedman}},
publisher = {SPIE},
booktitle = {Medical Imaging 2000: Image Processing, San Diego, CA, United States, 12-18 February 2000}
}
@inproceedings{conf/miip/WoodsMWF00,
title = {Patient site model supported change detection.},
year = {2000},
booktitle = {Medical Imaging: Image Processing},
author = {{Kelvin Woods} and {Maxine A. McClain} and {Yue Joseph Wang} and {Matthew T. Freedman}},
publisher = {SPIE},
booktitle = {Medical Imaging 2000: Image Processing, San Diego, CA, United States, 12-18 February 2000}
}
@article{journals/tnn/WangLFK00,
title = {Probabilistic principal component subspaces: a hierarchical finite mixture model for data visualization.},
year = {2000},
journal = {IEEE Trans. Neural Networks Learn. Syst.},
author = {{Yue Joseph Wang} and {Lan Luo} and {Matthew T. Freedman} and {Sun-Yuan Kung}}
}
@inproceedings{conf/aipr/SrikanchanaHXFW01,
title = {Mixture of Principal Axes Registration for Change Analysis in Computer-Aided Diagnosis.},
year = {2001},
booktitle = {AIPR},
author = {{Rujirutana Srikanchana} and {Kun Huang} and {Jianhua Xuan} and {Matthew T. Freedman} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {30th Applied Image Pattern Recognition Workshop (AIPR 2001), Analysis and Understanding of Time Varying Imagery, 10-12 October 2001, Washington, DC, USA, Proceedings}
}
@article{journals/titb/WangAXS01,
title = {Magnetic resonance image analysis by information theoretic criteria and stochastic site models.},
year = {2001},
journal = {IEEE Trans. Inf. Technol. Biomed.},
author = {{Yue Joseph Wang} and {Tülay Adali} and {Jianhua Xuan} and {Zsolt Szabo}}
}
@article{journals/tmi/LiWLLF01,
title = {Computerized Radiographic Mass Detection - Part I: Lesion Site Selection by Morphological Enhancement and Contextual Segmentation.},
year = {2001},
journal = {IEEE Trans. Medical Imaging},
author = {{Huai Li} and {Yue Joseph Wang} and {K. J. Ray Liu} and {Shih-Chung Ben Lo} and {Matthew T. Freedman}}
}
@article{journals/tmi/LiWLLF01a,
title = {Computerized Radiographic Mass Detection - Part II: Decision Support by Featured Database Visualization and Modular Neural Networks.},
year = {2001},
journal = {IEEE Trans. Medical Imaging},
author = {{Huai Li} and {Yue Joseph Wang} and {K. J. Ray Liu} and {Shih-Chung Ben Lo} and {Matthew T. Freedman}}
}
@inproceedings{conf/isbi/WangZHKS02,
title = {Independent component imaging of disease signatures.},
year = {2002},
booktitle = {ISBI},
author = {{Yue Joseph Wang} and {Junying Zhang} and {Kun Huang} and {Javed I. Khan} and {Zsolt Szabo}},
publisher = {IEEE},
booktitle = {Proceedings of the 2002 IEEE International Symposium on Biomedical Imaging, Ritz-Carlton Hotel, Washington, DC, USA, 7-10 June 2002}
}
@inproceedings{conf/miip/HuangXVFSHSW02,
title = {MR-image-based tissue analysis and its clinical applications.},
year = {2002},
booktitle = {Medical Imaging: Image Processing},
author = {{Kun Huang} and {Jianhua Xuan} and {József Varga} and {Matthew T. Freedman} and {Zsolt Szabo} and {Dan Hayes 002} and {Vered Stearns} and {Yue Joseph Wang}},
publisher = {SPIE},
booktitle = {Medical Imaging 2002: Image Processing, San Diego, California, United States, 23-28 February 2002}
}
@inproceedings{conf/miip/SrikanchanaXHFW02,
title = {Mixture of principal axes registration: a neural computation approach.},
year = {2002},
booktitle = {Medical Imaging: Image Processing},
author = {{Rujirutana Srikanchana} and {Jianhua Xuan} and {Kun Huang} and {Matthew T. Freedman} and {Yue Joseph Wang}},
publisher = {SPIE},
booktitle = {Medical Imaging 2002: Image Processing, San Diego, California, United States, 23-28 February 2002}
}
@inproceedings{conf/miip/ZhaoLFW02,
title = {Enhanced lung cancer detection in temporal subtraction chest radiography using directional edge filtering techniques.},
year = {2002},
booktitle = {Medical Imaging: Image Processing},
author = {{Hui Zhao 015} and {Shih-Chung Benedict Lo} and {Matthew T. Freedman} and {Yue Joseph Wang}},
publisher = {SPIE},
booktitle = {Medical Imaging 2002: Image Processing, San Diego, California, United States, 23-28 February 2002}
}
@article{journals/tip/WangWM02,
title = {Information-theoretic matching of two point sets.},
year = {2002},
journal = {IEEE Trans. Image Process.},
author = {{Yue Joseph Wang} and {Kelvin Woods} and {Maxine A. McClain}}
}
@article{journals/titb/WangLLGC02,
title = {Iterative normalization of cDNA microarray data.},
year = {2002},
journal = {IEEE Trans. Inf. Technol. Biomed.},
author = {{Yue Joseph Wang} and {Jianping Lu} and {Richard Lee 002} and {Zhiping Gu} and {Robert Clarke}}
}
@article{journals/tmi/LoLWKF02,
title = {A Multiple Circular Paths Convolution Neural Network System for Detection of Mammographic Masses.},
year = {2002},
journal = {IEEE Trans. Medical Imaging},
author = {{Shih-Chung Ben Lo} and {Huai Li} and {Yue Joseph Wang} and {Lisa Kinnard} and {Matthew T. Freedman}}
}
@inproceedings{conf/icmcs/WangKZKXW03,
title = {Computational intelligence approach for gene expression data mining and classification.},
year = {2003},
booktitle = {ICME},
author = {{Zuyi Wang} and {Sun-Yuan Kung} and {Junying Zhang} and {Javed I. Khan} and {Jianhua Xuan} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {Proceedings of the 2003 IEEE International Conference on Multimedia and Expo, ICME 2003, 6-9 July 2003, Baltimore, MD, USA}
}
@inproceedings{conf/miip/XuanFW03,
title = {Finite-element deformable sheet-curve models for registration of breast MR images.},
year = {2003},
booktitle = {Medical Imaging: Image Processing},
author = {{Jianhua Xuan} and {Matthew T. Freedman} and {Yue Joseph Wang}},
publisher = {SPIE},
booktitle = {Medical Imaging 2003: Image Processing, San Diego, California, United States, 15-20 February 2003}
}
@inproceedings{conf/miip/ZhangSXCLW03,
title = {Partially independent component analysis of tumor heterogeneities by DCE-MRI.},
year = {2003},
booktitle = {Medical Imaging: Image Processing},
author = {{Junying Zhang} and {Rujirutana Srikanchana} and {Jianhua Xuan} and {Peter L. Choyke} and {King C. Li} and {Yue Joseph Wang}},
publisher = {SPIE},
booktitle = {Medical Imaging 2003: Image Processing, San Diego, California, United States, 15-20 February 2003}
}
@inproceedings{conf/nnsp/WangXSZSBCL03,
title = {Computed simultaneous imaging of multiple biomarkers.},
year = {2003},
booktitle = {NNSP},
author = {{Yue Joseph Wang} and {Jianhua Xuan} and {Rujirutana Srikanchana} and {Junying Zhang} and {Zsolt Szabo} and {Zaver M. Bhujwalla} and {Peter L. Choyke} and {King C. Li}},
publisher = {IEEE},
booktitle = {NNSP 2003, IEEE XIII Workshop on Neural Networks for Signal Processing, Toulouse, France, September 17-19, 2003.}
}
@inproceedings{conf/nnsp/WangZKCG03,
title = {Partially-independent component analysis for tissue heterogeneity correction in microarray gene expression analysis.},
year = {2003},
booktitle = {NNSP},
author = {{Yue Joseph Wang} and {Junying Zhang} and {Javed I. Khan} and {Robert Clarke} and {Zhiping Gu}},
publisher = {IEEE},
booktitle = {NNSP 2003, IEEE XIII Workshop on Neural Networks for Signal Processing, Toulouse, France, September 17-19, 2003.}
}
@article{journals/vlsisp/WangWLKZLXKC03,
title = {Discriminatory Mining of Gene Expression Microarray Data.},
year = {2003},
journal = {J. VLSI Signal Process.},
author = {{Zuyi Wang} and {Yue Joseph Wang} and {Jianping Lu} and {Sun-Yuan Kung} and {Junying Zhang} and {Richard Lee 002} and {Jianhua Xuan} and {Javed I. Khan} and {Robert Clarke}}
}
@inproceedings{conf/iastedCCS/XuanWZA04,
title = {A discontinuity-embedded deformable model for surface modeling.},
year = {2004},
booktitle = {Circuits, Signals, and Systems},
author = {{Jianhua Xuan} and {Yue Joseph Wang} and {Qinfen Zheng} and {Tülay Adali}},
publisher = {IASTED/ACTA Press},
booktitle = {Proceedings of the Second IASTED International Conference on Circuits, Signals, and Systems, Clearwater Beach, FL, USA, November 28, 2004 - December 1, 2004}
}
@inproceedings{conf/icip/ZhangWMW04,
title = {Image fusion based on non-negative matrix factorization.},
year = {2004},
booktitle = {ICIP},
author = {{Junying Zhang} and {Le Wei} and {Qiguang Miao} and {Yue Joseph Wang}},
publisher = {IEEE},
booktitle = {Proceedings of the 2004 International Conference on Image Processing, ICIP 2004, Singapore, October 24-27, 2004}
}
@inproceedings{conf/icpr/XuanDKHCW04,
title = {Robust Feature Selection by Weighted Fisher Criterion for Multiclass Prediction in Gene Expression Profiling.},
year = {2004},
booktitle = {ICPR (2)},
author = {{Jianhua Xuan} and {Yibin Dong} and {Javed I. Khan} and {Eric P. Hoffman} and {Robert Clarke} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {17th International Conference on Pattern Recognition, ICPR 2004, Cambridge, UK, August 23-26, 2004.}
}
@inproceedings{conf/isbi/HanWLW04,
title = {Simultaneous Estimation of Kinetic Parameters and the Input Function from DCE-MRI Data: Theory and Simulation.},
year = {2004},
booktitle = {ISBI},
author = {{Zhu Han 001} and {Z. Jane Wang 001} and {K. J. Ray Liu} and {Yue Joseph Wang}},
publisher = {IEEE},
booktitle = {Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Arlington, VA, USA, 15-18 April 2004}
}
@inproceedings{conf/isbi/WangSCXS04,
title = {Computed Simultaneous Imaging of Multiple Functional Biomarkers.},
year = {2004},
booktitle = {ISBI},
author = {{Yue Joseph Wang} and {Rujirutana Srikanchana} and {Peter L. Choyke} and {Jianhua Xuan} and {Zsolt Szabo}},
publisher = {IEEE},
booktitle = {Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Arlington, VA, USA, 15-18 April 2004}
}
@article{journals/chinaf/ZhangWKC04,
title = {Gene selection in class space for molecular classification of cancer.},
year = {2004},
journal = {Sci. China Ser. F Inf. Sci.},
author = {{Junying Zhang} and {Yue Joseph Wang} and {Javed I. Khan} and {Robert Clarke}}
}
@article{journals/chinaf/ZhangWSW04,
title = {Output-threshold coupled neural network for solving the shortest path problems.},
year = {2004},
journal = {Sci. China Ser. F Inf. Sci.},
author = {{Junying Zhang} and {Defeng Wang} and {Meihong Shi} and {Yue Joseph Wang}}
}
@article{journals/vlsisp/SrikanchanaXFNW04,
title = {Non-Rigid Image Registration by Neural Computation.},
year = {2004},
journal = {J. VLSI Signal Process.},
author = {{Rujirutana Srikanchana} and {Jianhua Xuan} and {Matthew T. Freedman} and {Charles C. Nguyen} and {Yue Joseph Wang}}
}
@incollection{books/ws/05/XuanDKCHW05,
title = {Gene Selection by Weighted Fisher criterion for Multiclass Prediction.},
year = {2005},
booktitle = {Advances in Bioinformatics and Its Applications},
author = {{Jianhua Xuan} and {Yibin Dong} and {Javed I. Khan} and {Robert Clarke} and {Eric P. Hoffman} and {Yue Wang 021}},
publisher = {World Scientific},
booktitle = {Advances in Bioinformatics and Its Applications}
}
@inproceedings{conf/bibe/XuanHCW05,
title = {Normalization of Microarray Data by Iterative Nonlinear Regression.},
year = {2005},
booktitle = {BIBE},
author = {{Jianhua Xuan} and {Eric P. Hoffman} and {Robert Clarke} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA}
}
@article{journals/spl/XuanWZA05,
title = {Discontinuity-embedded deformable models for surface reconstruction from range images.},
year = {2005},
journal = {IEEE Signal Process. Lett.},
author = {{Jianhua Xuan} and {Yue Joseph Wang} and {Qinfen Zheng} and {Tülay Adali}}
}
@inproceedings{conf/caine/MolineauxXGZHCW06,
title = {ModVis: An information visualization tool for gene module discovery.},
year = {2006},
booktitle = {CAINE},
author = {{Justin Molineaux} and {Jianhua Xuan} and {Ting Gong} and {Yitan Zhu} and {Eric P. Hoffman} and {Robert Clarke} and {Yue Joseph Wang}},
publisher = {ISCA},
booktitle = {Proceedings of the ISCA 19th International Conference on Computer Applications in Industry and Engineering, CAINE 2006, November 13-15, 2006, Las Vegas, Nevada, USA}
}
@inproceedings{conf/cibcb/RessomZXWC06,
title = {Inference of Gene Regulatory Networks from Time Course Gene Expression Data Using Neural Networks and Swarm Intelligence.},
year = {2006},
booktitle = {CIBCB},
author = {{Habtom W. Ressom} and {Yuji Zhang} and {Jianhua Xuan} and {Yue Joseph Wang} and {Robert Clarke}},
publisher = {IEEE},
booktitle = {Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2006, Renaissance Hotel Downtown, Toronto, Ontario, Canada, September 28-29, 2006}
}
@inproceedings{conf/embc/GongZXLCHW06,
title = {Latent Variable and nICA Modeling of Pathway Gene Module Composite.},
year = {2006},
booktitle = {EMBC},
author = {{Ting Gong} and {Yitan Zhu} and {Jianhua Xuan} and {Huai Li} and {Robert Clarke} and {Eric P. Hoffman} and {Yue Wang 021}},
publisher = {IEEE},
booktitle = {28th International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2006, New York City, NY, USA, August 30 - September 3, 2006, Main Volume}
}
@inproceedings{conf/embc/RessomZXWC06,
title = {Inferring Network Interactions Using Recurrent Neural Networks and Swarm Intelligence.},
year = {2006},
booktitle = {EMBC},
author = {{Habtom W. Ressom} and {Yuji Zhang} and {Jianhua Xuan} and {Yue Wang 021} and {Robert Clarke}},
publisher = {IEEE},
booktitle = {28th International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2006, New York City, NY, USA, August 30 - September 3, 2006, Main Volume}
}
@inproceedings{conf/embc/ZhuWFXMHW06,
title = {Phenotypic-Specific Gene Module Discovery using a Diagnostic Tree and caBIGTM VISDA.},
year = {2006},
booktitle = {EMBC},
author = {{Yitan Zhu} and {Zuyi Wang} and {Yuanjian Feng} and {Jianhua Xuan} and {David J. Miller 001} and {Eric P. Hoffman} and {Yue Wang 021}},
publisher = {IEEE},
booktitle = {28th International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2006, New York City, NY, USA, August 30 - September 3, 2006, Main Volume}
}
@inproceedings{conf/isbi/LiuLFWRKLL06,
title = {Transmission ultrasound computed tomography using a PE-CMOS sensor array: a preliminary animal study.},
year = {2006},
booktitle = {ISBI},
author = {{Chu Chuan Liu} and {Shih-Chung Ben Lo} and {Matthew T. Freedman} and {Yue Joseph Wang} and {David Rich} and {John Kula} and {Bob Lasser} and {Marvin E. Lasser}},
publisher = {IEEE},
booktitle = {Proceedings of the 2006 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Arlington, VA, USA, 6-9 April 2006}
}
@inproceedings{conf/isnn/ZhangHWW06,
title = {Blind Source Separation with Pattern Expression NMF.},
year = {2006},
booktitle = {ISNN (1)},
author = {{Junying Zhang} and {Hongyi Zhang} and {Le Wei} and {Yue Joseph Wang}},
publisher = {Springer},
booktitle = {Advances in Neural Networks - ISNN 2006, Third International Symposium on Neural Networks, Chengdu, China, May 28 - June 1, 2006, Proceedings, Part I}
}
@inproceedings{conf/prib/WangWCC06,
title = {Blind Separation of Multichannel Biomedical Image Patterns by Non-negative Least-Correlated Component Analysis.},
year = {2006},
booktitle = {PRIB},
author = {{Fa-Yu Wang} and {Yue Joseph Wang} and {Tsung-Han Chan} and {Chong-Yung Chi}},
publisher = {Springer},
booktitle = {Pattern Recognition in Bioinformatics, International Workshop, PRIB 2006, Hong Kong, China, August 20, 2006, Proceedings}
}
@article{journals/bioinformatics/WangWXDBFCH06,
title = {Optimized multilayer perceptrons for molecular classification and diagnosis using genomic data.},
year = {2006},
journal = {Bioinform.},
author = {{Zuyi Wang} and {Yue Joseph Wang} and {Jianhua Xuan} and {Yibin Dong} and {Marina Bakay} and {Yuanjian Feng} and {Robert Clarke} and {Eric P. Hoffman}}
}
@article{journals/ejasp/ChiLLWY06,
title = {Multisensor Processing for Signal Extraction and Applications.},
year = {2006},
journal = {EURASIP J. Adv. Signal Process.},
author = {{Chong-Yung Chi} and {Ta-Sung Lee} and {Zhi-Quan Luo} and {Yue Joseph Wang} and {Kung Yao}}
}
@article{journals/ijbi/WangXSC06,
title = {Modeling and Reconstruction of Mixed Functional and Molecular Patterns.},
year = {2006},
journal = {Int. J. Biomed. Imaging},
author = {{Yue Joseph Wang} and {Jianhua Xuan} and {Rujirutana Srikanchana} and {Peter L. Choyke}}
}
@article{journals/ijbi/XuanWFAS06,
title = {Nonrigid Medical Image Registration by Finite-Element Deformable Sheet-Curve Models.},
year = {2006},
journal = {Int. J. Biomed. Imaging},
author = {{Jianhua Xuan} and {Yue Joseph Wang} and {Matthew T. Freedman} and {Tülay Adali} and {Peter G. Shields}}
}
@inproceedings{conf/bibe/WangXFSW07,
title = {Rat Mammary Fat Pad Segmentation and Growth Rate Evaluation in T1 Weighted MR Images.},
year = {2007},
booktitle = {BIBE},
author = {{Bin Wang} and {Jianhua Xuan} and {Matthew T. Freedman} and {Peter G. Shields} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, USA}
}
@inproceedings{conf/biocomp/WangXGCHW07,
title = {Stability-Based Dimension Estimation of ICA with Application to Microarray Data Analysis.},
year = {2007},
booktitle = {BIOCOMP},
author = {{Chen Wang 001} and {Jianhua Xuan} and {Ting Gong} and {Robert Clarke} and {Eric P. Hoffman} and {Yue Joseph Wang}},
publisher = {CSREA Press},
booktitle = {International Conference on Bioinformatics & Computational Biology, BIOCOMP 2007, Volume I, June 25-28, 2007, Las Vegas Nevada, USA}
}
@inproceedings{conf/icassp/ChanMCW07,
title = {A Convex Analysis Based Criterion for Blind Separation of Non-Negative Sources.},
year = {2007},
booktitle = {ICASSP (3)},
author = {{Tsung-Han Chan} and {Wing-Kin Ma} and {Chong-Yung Chi} and {Yue Wang 021}},
publisher = {IEEE},
booktitle = {Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2007, Honolulu, Hawaii, USA, April 15-20, 2007}
}
@inproceedings{conf/icmla/ChenWSWZWCHX07,
title = {Biomarker Identification by Knowledge-Driven Multi-Level ICA and Motif Analysis.},
year = {2007},
booktitle = {ICMLA},
author = {{Li Chen 018} and {Chen Wang 001} and {Ie-Ming Shih} and {Tian-Li Wang} and {Zhen Zhang} and {Yue Joseph Wang} and {Robert Clarke} and {Eric P. Hoffman} and {Jianhua Xuan}},
publisher = {IEEE Computer Society},
booktitle = {The Sixth International Conference on Machine Learning and Applications, ICMLA 2007, Cincinnati, Ohio, USA, 13-15 December 2007}
}
@inproceedings{conf/mva/WangXFSW07,
title = {Rat Mammary Gland Analysis in T1 Weighted MR Images.},
year = {2007},
booktitle = {MVA},
author = {{Bin Wang} and {Jianhua Xuan} and {Matthew T. Freedman} and {Peter G. Shields} and {Yue Joseph Wang}},
booktitle = {Proceedings of the IAPR Conference on Machine Vision Applications (IAPR MVA 2007), May 16-18, 2007, Tokyo, Japan}
}
@article{journals/bioinformatics/WangLZYNSSXCW07,
title = {VISDA: an open-source caBIGTM analytical tool for data clustering and beyond.},
year = {2007},
journal = {Bioinform.},
author = {{Jiajing Wang} and {Huai Li} and {Yitan Zhu} and {Malik Yousef} and {Michael Nebozhyn} and {Michael M. Showe} and {Louise C. Showe} and {Jianhua Xuan} and {Robert Clarke} and {Yue Joseph Wang}}
}
@article{journals/ejbsb/XuanWDFWKBWPWCCH07,
title = {Gene Selection for Multiclass Prediction by Weighted Fisher Criterion.},
year = {2007},
journal = {EURASIP J. Bioinform. Syst. Biol.},
author = {{Jianhua Xuan} and {Yue Joseph Wang} and {Yibin Dong} and {Yuanjian Feng} and {Bin Wang} and {Javed I. Khan} and {Marina Bakay} and {Zuyi Wang} and {Lauren Pachman} and {Sara Winokur} and {Yi-Wen Chen} and {Robert Clarke} and {Eric P. Hoffman}}
}
@article{journals/ijbi/XuanKZCZW07,
title = {Improved Diagnostics Using Polarization Imaging and Artificial Neural Networks.},
year = {2007},
journal = {Int. J. Biomed. Imaging},
author = {{Jianhua Xuan} and {Uwe Klimach} and {Hongzhi Zhao} and {Qiushui Chen} and {Yingyin Zou} and {Yue Joseph Wang}}
}
@inproceedings{conf/bcbgc/XiongWZWHCX08,
title = {Inferring Condition-Specific miRNA-Gene Modules from miRNA and mRNA Profiling Data.},
year = {2008},
booktitle = {BCBGC},
author = {{Jianghui Xiong} and {Chen Wang 001} and {Bai Zhang} and {Yue Joseph Wang} and {Eric P. Hoffman} and {Robert Clarke} and {Jianhua Xuan}},
publisher = {ISRST},
booktitle = {International Conference on Bioinformatics, Computational Biology, Genomics and Chemoinformatics, BCBGC-08, Orlando, Florida, USA , July 7-10, 2008}
}
@inproceedings{conf/biocomp/ChenXRWHC08,
title = {Identification of Condition-specific Regulatory Modules by Multi-level Motif and mRNA Expression Analysis.},
year = {2008},
booktitle = {BIOCOMP},
author = {{Li Chen 018} and {Jianhua Xuan} and {Rebecca B. Riggins} and {Yue Joseph Wang} and {Eric P. Hoffman} and {Robert Clarke}},
publisher = {CSREA Press},
booktitle = {International Conference on Bioinformatics & Computational Biology, BIOCOMP 2008, July 14-17, 2008, Las Vegas Nevada, USA, 2 Volumes}
}
@inproceedings{conf/biocomp/GongXRWHC08,
title = {Exploring Transcriptional Modules Through Integrative Gene Clustering Guided by Transcription Factor Binding Information.},
year = {2008},
booktitle = {BIOCOMP},
author = {{Ting Gong} and {Jianhua Xuan} and {Rebecca B. Riggins} and {Yue Joseph Wang} and {Eric P. Hoffman} and {Robert Clarke}},
publisher = {CSREA Press},
booktitle = {International Conference on Bioinformatics & Computational Biology, BIOCOMP 2008, July 14-17, 2008, Las Vegas Nevada, USA, 2 Volumes}
}
@inproceedings{conf/icassp/ChanMCW08,
title = {Blind separation of non-negative sources by convex analysis: Effective method using linear programming.},
year = {2008},
booktitle = {ICASSP},
author = {{Tsung-Han Chan} and {Wing-Kin Ma} and {Chong-Yung Chi} and {Yue Joseph Wang}},
publisher = {IEEE},
booktitle = {Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2008, March 30 - April 4, 2008, Caesars Palace, Las Vegas, Nevada, USA}
}
@inproceedings{conf/iciar/ZhouXWW08,
title = {3-D Deformation Guided On-Line Modification of Multi-leaf Collimators for Adaptive Radiation Therapy.},
year = {2008},
booktitle = {ICIAR},
author = {{Bin Zhou} and {Jianhua Xuan} and {Qingrong Wu} and {Yue Joseph Wang}},
publisher = {Springer},
booktitle = {Image Analysis and Recognition, 5th International Conference, ICIAR 2008, Póvoa de Varzim, Portugal, June 25-27, 2008. Proceedings}
}
@inproceedings{conf/icmla/ChenXWRC08,
title = {Network-Constrained Support Vector Machine for Classification.},
year = {2008},
booktitle = {ICMLA},
author = {{Li Chen 018} and {Jianhua Xuan} and {Yue Joseph Wang} and {Rebecca B. Riggins} and {Robert Clarke}},
publisher = {IEEE Computer Society},
booktitle = {Seventh International Conference on Machine Learning and Applications, ICMLA 2008, San Diego, California, USA, 11-13 December 2008}
}
@inproceedings{conf/icpr/TaoXFCSW08,
title = {Imaging biomarker analysis of rat mammary fat pads and glandular tissues in MRI images.},
year = {2008},
booktitle = {ICPR},
author = {{Yimo Tao} and {Jianhua Xuan} and {Matthew T. Freedman} and {Gloria Chepko} and {Peter G. Shields} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {19th International Conference on Pattern Recognition (ICPR 2008), December 8-11, 2008, Tampa, Florida, USA}
}
@inproceedings{conf/isbi/ChenCCCWW08,
title = {Convex analysis and separation of composite signals in DCE-MRI.},
year = {2008},
booktitle = {ISBI},
author = {{Li Chen 018} and {Tsung-Han Chan} and {Peter L. Choyke} and {Chong-Yung Chi} and {Ge Wang 001} and {Yue Joseph Wang}},
publisher = {IEEE},
booktitle = {Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, May 14-17, 2008}
}
@inproceedings{conf/isbra/GongXCRWHC08,
title = {Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information.},
year = {2008},
booktitle = {ISBRA},
author = {{Ting Gong} and {Jianhua Xuan} and {Li Chen 018} and {Rebecca B. Riggins} and {Yue Joseph Wang} and {Eric P. Hoffman} and {Robert Clarke}},
publisher = {Springer},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}
}
@inproceedings{conf/isbra/WangXCZWCH08,
title = {Integrative Network Component Analysis for Regulatory Network Reconstruction.},
year = {2008},
booktitle = {ISBRA},
author = {{Chen Wang 001} and {Jianhua Xuan} and {Li Chen 018} and {Po Zhao} and {Yue Joseph Wang} and {Robert Clarke} and {Eric P. Hoffman}},
publisher = {Springer},
booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}
}
@inproceedings{conf/miip/WangXWZW08,
title = {Deformation estimation and analysis for adaptive radiation therapy.},
year = {2008},
booktitle = {Medical Imaging: Image Processing},
author = {{Bin Wang} and {Jianhua Xuan} and {Qingrong Jackie Wu} and {Su Zhang} and {Yue Wang 021}},
publisher = {SPIE},
booktitle = {Medical Imaging 2008: Image Processing, San Diego, California, United States, 16-21 February 2008}
}
@article{journals/bmcbi/ChenXWSWZHC08,
title = {Knowledge-guided multi-scale independent component analysis for biomarker identification.},
year = {2008},
journal = {BMC Bioinform.},
author = {{Li Chen 018} and {Jianhua Xuan} and {Chen Wang 001} and {Ie-Ming Shih} and {Yue Joseph Wang} and {Zhen Zhang} and {Eric P. Hoffman} and {Robert Clarke}}
}
@article{journals/bmcbi/WangXCZWCH08,
title = {Motif-directed network component analysis for regulatory network inference.},
year = {2008},
journal = {BMC Bioinform.},
author = {{Chen Wang 001} and {Jianhua Xuan} and {Li Chen 018} and {Po Zhao} and {Yue Joseph Wang} and {Robert Clarke} and {Eric P. Hoffman}}
}
@article{journals/bmcbi/ZhuLMWXCHW08,
title = {caBIGTM VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data.},
year = {2008},
journal = {BMC Bioinform.},
author = {{Yitan Zhu} and {Huai Li} and {David J. Miller 001} and {Zuyi Wang} and {Jianhua Xuan} and {Robert Clarke} and {Eric P. Hoffman} and {Yue Joseph Wang}}
}
@article{journals/ijon/MillerPW08,
title = {Extensions of transductive learning for distributed ensemble classification and application to biometric authentication.},
year = {2008},
journal = {Neurocomputing},
author = {{David J. Miller 001} and {Siddharth Pal} and {Yue Joseph Wang}}
}
@article{journals/tsp/ChanMCW08,
title = {A Convex Analysis Framework for Blind Separation of Non-Negative Sources.},
year = {2008},
journal = {IEEE Trans. Signal Process.},
author = {{Tsung-Han Chan} and {Wing-Kin Ma} and {Chong-Yung Chi} and {Yue Joseph Wang}}
}
@inproceedings{conf/bibm/FengYWSW09,
title = {Analyzing DNA Copy Number Changes Using Fused Margin Regression.},
year = {2009},
booktitle = {BIBM},
author = {{Yuanjian Feng} and {Guoqiang Yu} and {Tian-Li Wang} and {Ie-Ming Shih} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {2009 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2009, Washington, DC, USA, November 1-4, 2009, Proceedings}
}
@inproceedings{conf/bibm/YuZXSW09,
title = {Accurate Estimation of Genomic Deletions and Normal Cell Contamination by Bayesian Analysis of Mixtures.},
year = {2009},
booktitle = {BIBM},
author = {{Guoqiang Yu} and {Bai Zhang} and {Jianfeng Xu} and {Ie-Ming Shih} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {2009 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2009, Washington, DC, USA, November 1-4, 2009, Proceedings}
}
@inproceedings{conf/csie/WangZXW09,
title = {A Graph-Based Approach for Clustering Analysis of Gene Expression Data by Using Topological Features.},
year = {2009},
booktitle = {CSIE (1)},
author = {{Wenjun Wang} and {Junying Zhang} and {Jin Xu} and {Yue Joseph Wang}},
publisher = {IEEE Computer Society},
booktitle = {CSIE 2009, 2009 WRI World Congress on Computer Science and Information Engineering, March 31 - April 2, 2009, Los Angeles, California, USA, 7 Volumes}
}
@article{journals/bioinformatics/MillerZYLCLHW09,
title = {An algorithm for learning maximum entropy probability models of disease risk that efficiently searches and sparingly encodes multilocus genomic interactions.},
year = {2009},
journal = {Bioinform.},
author = {{David J. Miller 001} and {Yanxin Zhang} and {Guoqiang Yu} and {Yongmei Liu 003} and {Li Chen 018} and {Carl D. Langefeld} and {David M. Herrington} and {Yue Joseph Wang}}
}
@article{journals/bioinformatics/ZhangLRZXZHCW09,
title = {Differential dependency network analysis to identify condition-specific topological changes in biological networks.},
year = {2009},
journal = {Bioinform.},
author = {{Bai Zhang} and {Huai Li} and {Rebecca B. Riggins} and {Ming Zhan} and {Jianhua Xuan} and {Zhen Zhang} and {Eric P. Hoffman} and {Robert Clarke} and {Yue Joseph Wang}}
}
@article{journals/ijcbdd/ChenXWHRC09,
title = {Identification of condition-specific regulatory modules through multi-level motif and mRNA expression analysis.},
year = {2009},
journal = {Int. J. Comput. Biol. Drug Des.},
author = {{Li Chen 018} and {Jianhua Xuan} and {Yue Joseph Wang} and {Eric P. Hoffman} and {Rebecca B. Riggins} and {Robert Clarke}}
}
@article{journals/ijdmb/ChenXWWSWZCH09,
title = {Biomarker identification by knowledge-driven multilevel ICA and motif analysis.},
year = {2009},
journal = {Int. J. Data Min. Bioinform.},
author = {{Li Chen 018} and {Jianhua Xuan} and {Chen Wang 001} and {Yue Joseph Wang} and {Ie-Ming Shih} and {Tian-Li Wang} and {Zhen Zhang} and {Robert Clarke} and {Eric P. Hoffman}}
}
@incollection{books/cu/10/MaCCW10,
title = {Convex analysis for non-negative blind source separation with application in imaging.},
year = {2010},
booktitle = {Convex Optimization in Signal Processing and Communications},
author = {{Wing-Kin Ma} and {Tsung-Han Chan} and {Chong-Yung Chi} and {Yue Wang 021}},
publisher = {Cambridge University Press},
booktitle = {Convex Optimization in Signal Processing and Communications.}
}
@inproceedings{conf/icmla/GuXWRC10,
title = {Identification of Transcriptional Regulatory Networks by Learning the Marginal Function of Outlier Sum Statistic.},
year = {2010},
booktitle = {ICMLA},
author = {{Jinghua Gu} and {Jianhua Xuan} and {Yue Joseph Wang} and {Rebecca B. Riggins} and {Robert Clarke}},
publisher = {IEEE Computer Society},
booktitle = {The Ninth International Conference on Machine Learning and Applications, ICMLA 2010, Washington, DC, USA, 12-14 December 2010}
}
@inproceedings{conf/uai/ZhangW10,
title = {Learning Structural Changes of Gaussian Graphical Models in Controlled Experiments.},
year = {2010},
booktitle = {UAI},
author = {{Bai Zhang} and {Yue Joseph Wang}},
publisher = {AUAI Press},
booktitle = {UAI 2010, Proceedings of the Twenty-Sixth Conference on Uncertainty in Artificial Intelligence, Catalina Island, CA, USA, July 8-11, 2010}
}
@article{journals/bioinformatics/ChenXRWHC10,
title = {Multilevel support vector regression analysis to identify condition-specific regulatory networks.},
year = {2010},
journal = {Bioinform.},
author = {{Li Chen 018} and {Jianhua Xuan} and {Rebecca B. Riggins} and {Yue Joseph Wang} and {Eric P. Hoffman} and {Robert Clarke}}
}
@article{journals/bmcbi/WangXLWZHC10,
title = {Knowledge-guided gene ranking by coordinative component analysis.},
year = {2010},
journal = {BMC Bioinform.},
author = {{Chen Wang 001} and {Jianhua Xuan} and {Huai Li} and {Yue Joseph Wang} and {Ming Zhan} and {Eric P. Hoffman} and {Robert Clarke}}
}
@article{journals/ijfipm/FengYWSW10,
title = {Analysing DNA copy number changes using Fused Margin Regression.},
year = {2010},
journal = {Int. J. Funct. Informatics Pers. Medicine},
author = {{Yuanjian Feng} and {Guoqiang Yu} and {Tian-Li Wang} and {Ie-Ming Shih} and {Yue Joseph Wang}}
}
@article{journals/jmlr/YuFMXHCDSW10,
title = {Matched Gene Selection and Committee Classifier for Molecular Classification of Heterogeneous Diseases.},
year = {2010},
journal = {J. Mach. Learn. Res.},
author = {{Guoqiang Yu} and {Yuanjian Feng} and {David J. Miller 001} and {Jianhua Xuan} and {Eric P. Hoffman} and {Robert Clarke} and {Ben Davidson} and {Ie-Ming Shih} and {Yue Joseph Wang}}
}
@article{journals/pami/WangCCW10,
title = {Nonnegative Least-Correlated Component Analysis for Separation of Dependent Sources by Volume Maximization.},
year = {2010},
journal = {IEEE Trans. Pattern Anal. Mach. Intell.},
author = {{Fa-Yu Wang} and {Chong-Yung Chi} and {Tsung-Han Chan} and {Yue Joseph Wang}}
}
@inproceedings{conf/bcb/TianZSW11,
title = {Knowledge-guided differential dependency network learning for detecting structural changes in biological networks.},
year = {2011},
booktitle = {BCB},
author = {{Ye Tian} and {Bai Zhang} and {Ie-Ming Shih} and {Yue Joseph Wang}},
publisher = {ACM},
booktitle = {ACM International Conference on Bioinformatics, Computational Biology and Biomedicine, BCB' 11, Chicago, IL, USA - July 31 - August 03, 2011}
}
@inproceedings{conf/bibm/RanjbarWR11,
title = {Quality assessment of LC-MS metabolomic data.},
year = {2011},
booktitle = {BIBM Workshops},
author = {{Mohammad R. Nezami Ranjbar} and {Yue Joseph Wang} and {Habtom W. Ressom}},
publisher = {IEEE Computer Society},
booktitle = {2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011, Atlanta, GA, USA, November 12-15, 2011}
}
@inproceedings{conf/bibm/TsaiTWR11,
title = {Bayesian Alignment Model for LC-MS Data.},
year = {2011},
booktitle = {BIBM},
author = {{Tsung-Heng Tsai} and {Mahlet G. Tadesse} and {Yue Joseph Wang} and {Habtom W. Ressom}},
publisher = {IEEE Computer Society},
booktitle = {IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2011, Atlanta, GA, USA, November 12-15, , 2011}
}
@inproceedings{conf/embc/GuWSWWCX11,
title = {GIST: A Gibbs sampler to identify intracellular signal transduction pathways.},
year = {2011},
booktitle = {EMBC},
author = {{Jinghua Gu} and {Chen Wang 001} and {Ie-Ming Shih} and {Tian-Li Wang} and {Yue Wang 021} and {Robert Clarke} and {Jianhua Xuan}},
publisher = {IEEE},
booktitle = {33rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2011, Boston, MA, USA, August 30 - Sept. 3, 2011}
}
@article{journals/bioinformatics/ChenCCHCBWWSW11,
title = {CAM-CM: a signal deconvolution tool for in vivo dynamic contrast-enhanced imaging of complex tissues.},
year = {2011},
journal = {Bioinform.},
author = {{Li Chen 018} and {Tsung-Han Chan} and {Peter L. Choyke} and {Elizabeth M. C. Hillman} and {Chong-Yung Chi} and {Zaver M. Bhujwalla} and {Ge Wang 001} and {Sean S. Wang} and {Zsolt Szabo} and {Yue Joseph Wang}}
}
@article{journals/bioinformatics/YuLHSCHMXW11,
title = {PUGSVM: a caBIGTM analytical tool for multiclass gene selection and predictive classification.},
year = {2011},
journal = {Bioinform.},
author = {{Guoqiang Yu} and {Huai Li} and {Sook S. Ha} and {Ie-Ming Shih} and {Robert Clarke} and {Eric P. Hoffman} and {Subha Madhavan} and {Jianhua Xuan} and {Yue Joseph Wang}}
}
@article{journals/bioinformatics/YuZBXSW11,
title = {BACOM: in silico detection of genomic deletion types and correction of normal cell contamination in copy number data.},
year = {2011},
journal = {Bioinform.},
author = {{Guoqiang Yu} and {Bai Zhang} and {G. Steven Bova} and {Jianfeng Xu} and {Ie-Ming Shih} and {Yue Joseph Wang}}
}
@article{journals/bioinformatics/ZhangTJLSMCHXHW11,
title = {DDN: a caBIG® analytical tool for differential network analysis.},
year = {2011},
journal = {Bioinform.},
author = {{Bai Zhang} and {Ye Tian} and {Lu Jin} and {Huai Li} and {Ie-Ming Shih} and {Subha Madhavan} and {Robert Clarke} and {Eric P. Hoffman} and {Jianhua Xuan} and {Leena Hilakivi-Clarke} and {Yue Joseph Wang}}
}
@article{journals/bmcbi/GongXCRLHCW11,
title = {Motif-guided sparse decomposition of gene expression data for regulatory module identification.},
year = {2011},
journal = {BMC Bioinform.},
author = {{Ting Gong} and {Jianhua Xuan} and {Li Chen 018} and {Rebecca B. Riggins} and {Huai Li} and {Eric P. Hoffman} and {Robert Clarke} and {Yue Joseph Wang}}
}
@article{journals/bmcsb/ChenXRCW11,
title = {Identifying cancer biomarkers by network-constrained support vector machines.},
year = {2011},
journal = {BMC Syst. Biol.},
author = {{Li Chen 018} and {Jianhua Xuan} and {Rebecca B. Riggins} and {Robert Clarke} and {Yue Joseph Wang}}
}
@article{journals/corr/abs-1106-2124,
title = {Omni-tomography/Multi-tomography -- Integrating Multiple Modalities for Simultaneous Imaging},
year = {2011},
journal = {CoRR},
author = {{Ge Wang 001} and {Jie Zhang} and {Hao Gao} and {Victor Weir} and {Hengyong Yu} and {Wenxiang Cong} and {Xiaochen Xu} and {Haiou Shen} and {James Bennett} and {Yue Joseph Wang} and {Michael W. Vannier}}
}
@article{journals/tmi/ChenCCCWW11,
title = {Tissue-Specific Compartmental Analysis for Dynamic Contrast-Enhanced MR Imaging of Complex Tumors.},
year = {2011},
journal = {IEEE Trans. Medical Imaging},
author = {{Li Chen 018} and {Peter L. Choyke} and {Tsung-Han Chan} and {Chong-Yung Chi} and {Ge Wang 001} and {Yue Joseph Wang}}
}
@inproceedings{conf/bibm/RanjbarZTWR12,
title = {Evaluation of normalization methods for analysis of LC-MS data.},
year = {2012},
booktitle = {BIBM Workshops},
author = {{Mohammad R. Nezami Ranjbar} and {Yi Zhao} and {Mahlet G. Tadesse} and {Yue Joseph Wang} and {Habtom W. Ressom}},
publisher = {IEEE Computer Society},
booktitle = {2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2012, Philadelphia, USA, October 4-7, 2012}
}
@inproceedings{conf/cvpr/SongCHWF12,
title = {Object localization in medical images based on graphical model with contrast and interest-region terms.},
year = {2012},
booktitle = {CVPR Workshops},
author = {{Yang Song 001} and {Weidong Cai 001} and {Heng Huang} and {Yue Wang 021} and {David Dagan Feng}},
publisher = {IEEE Computer Society},
booktitle = {2012 IEEE Computer Society Conference on Computer Vision and Pattern Recognition Workshops, Providence, RI, USA, June 16-21, 2012}
}
@inproceedings{conf/gensips/RanjbarTWR12,
title = {Normalization of LC-MS data using Gaussian process.},
year = {2012},
booktitle = {GENSiPS},
author = {{Mohammad R. Nezami Ranjbar} and {Mahlet G. Tadesse} and {Yue Joseph Wang} and {Habtom W. Ressom}},
publisher = {IEEE},
booktitle = {Proceedings 2012 IEEE International Workshop on Genomic Signal Processing and Statistics, GENSiPS 2012, Washington, DC, USA, December 2-4, 2012}
}
@inproceedings{conf/isbi/SongCWF12,
title = {Location classification of lung nodules with optimized graph construction.},
year = {2012},
booktitle = {ISBI},
author = {{Yang Song 001} and {Weidong Cai 001} and {Yue Wang 021} and {David Dagan Feng}},
publisher = {IEEE},
booktitle = {9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2012, May 2-5, 2012, Barcelona, Spain, Proceedings}
}
@inproceedings{conf/miccai/SongCHWF12,
title = {Context Enhanced Graphical Model for Object Localization in Medical Images.},
year = {2012},
booktitle = {MCV},
author = {{Yang Song 001} and {Weidong Cai 001} and {Heng Huang} and {Yue Wang 021} and {David Dagan Feng}},
publisher = {Springer},
booktitle = {Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging - Second International MICCAI Workshop, MCV 2012, Nice, France, October 5, 2012, Revised Selected Papers}
}
@inproceedings{conf/psb/ChenXGWCZWS12,
title = {Integrative Network Analysis to Identify Aberrant Pathway Networks in Ovarian Cancer.},
year = {2012},
booktitle = {Pacific Symposium on Biocomputing},
author = {{Li Chen 018} and {Jianhua Xuan} and {Jinghua Gu} and {Yue Wang 021} and {Zhen Zhang} and {Tian-Li Wang} and {Ie-Ming Shih}},
publisher = {World Scientific Publishing},
booktitle = {Biocomputing 2012: Proceedings of the Pacific Symposium, Kohala Coast, Hawaii, USA, January 3-7, 2012}
}
@inproceedings{conf/waim/ZhuYWW12,
title = {Improving Text Search on Hybrid Data.},
year = {2012},
booktitle = {WAIM Workshops},
author = {{Huaijie Zhu} and {Xiaochun Yang 001} and {Bin Wang 015} and {Yue Joseph Wang}},
publisher = {Springer},
booktitle = {Web-Age Information Management - WAIM 2012 International Workshops: GDMM, IWSN, MDSP, USDM, and XMLDM Harbin, China, August 18-20, 2012 Proceedings}
}
@article{journals/ijon/WangHXWH12,
title = {Computational analysis of muscular dystrophy sub-types using a novel integrative scheme.},
year = {2012},
journal = {Neurocomputing},
author = {{Chen Wang 001} and {Sook S. Ha} and {Jianhua Xuan} and {Yue Joseph Wang} and {Eric P. Hoffman}}
}
@article{journals/jcb/Yuan0ZHW12,
title = {An Overview of Population Genetic Data Simulation.},
year = {2012},
journal = {J. Comput. Biol.},
author = {{Xiguo Yuan} and {David J. Miller 001} and {Junying Zhang} and {David M. Herrington} and {Yue Wang 021}}
}
@article{journals/sigpro/WangXSCW12,
title = {Regulatory component analysis: A semi-blind extraction approach to infer gene regulatory networks with imperfect biological knowledge.},
year = {2012},
journal = {Signal Process.},
author = {{Chen Wang 001} and {Jianhua Xuan} and {Ie-Ming Shih} and {Robert Clarke} and {Yue Joseph Wang}}
}
@article{journals/tnn/ZhangMW12,
title = {Nonlinear System Modeling With Random Matrices: Echo State Networks Revisited.},
year = {2012},
journal = {IEEE Trans. Neural Networks Learn. Syst.},
author = {{Bai Zhang} and {David J. Miller 001} and {Yue Joseph Wang}}
}
@inproceedings{conf/bibm/WanMZWK13,
title = {An ensemble classifier with random projection for predicting multi-label protein subcellular localization.},
year = {2013},
booktitle = {BIBM},
author = {{Shibiao Wan} and {Man-Wai Mak} and {Bai Zhang} and {Yue Joseph Wang} and {Sun-Yuan Kung}},
publisher = {IEEE Computer Society},
booktitle = {2013 IEEE International Conference on Bioinformatics and Biomedicine, Shanghai, China, December 18-21, 2013}
}
@article{journals/bioinformatics/TsaiTPPMWR13,
title = {Multi-profile Bayesian alignment model for LC-MS data analysis with integration of internal standards.},
year = {2013},
journal = {Bioinform.},
author = {{Tsung-Heng Tsai} and {Mahlet G. Tadesse} and {Cristina Di Poto} and {Lewis K. Pannell} and {Yehia Mechref} and {Yue Joseph Wang} and {Habtom W. Ressom}}
}
@article{journals/bmcbi/SongCHWFC13,
title = {Region-based progressive localization of cell nuclei in microscopic images with data adaptive modeling.},
year = {2013},
journal = {BMC Bioinform.},
author = {{Yang Song 001} and {Weidong Cai 001} and {Heng Huang} and {Yue Wang 021} and {David Dagan Feng} and {Mei Chen}}
}
@article{journals/jmlr/WangMCMCHXW13,
title = {The CAM software for nonnegative blind source separation in R-Java.},
year = {2013},
journal = {J. Mach. Learn. Res.},
author = {{Niya Wang} and {Fan Meng} and {Li Chen 018} and {Subha Madhavan} and {Robert Clarke} and {Eric P. Hoffman} and {Jianhua Xuan} and {Yue Joseph Wang}}
}
@article{journals/tcbb/TsaiTWR13,
title = {Profile-Based LC-MS Data Alignment-A Bayesian Approach.},
year = {2013},
journal = {IEEE ACM Trans. Comput. Biol. Bioinform.},
author = {{Tsung-Heng Tsai} and {Mahlet G. Tadesse} and {Yue Joseph Wang} and {Habtom W. Ressom}}
}
@inproceedings{conf/embc/IbrahimYCW14,
title = {Enhancing the convex analysis of mixtures technique for estimating DCE-MRI pharmacokinetic parameters.},
year = {2014},
booktitle = {EMBC},
author = {{Ibrahim Mohamed Ibrahim} and {Guoqiang Yu} and {Li Chen 018} and {Yue Wang 021}},
publisher = {IEEE},
booktitle = {36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014, Chicago, IL, USA, August 26-30, 2014}
}
@inproceedings{conf/globalsip/TianZFYW14,
title = {A statistical approach to identifying significant transgenerational methylation changes.},
year = {2014},
booktitle = {GlobalSIP},
author = {{Ye Tian} and {Bai Zhang} and {Yi Fu} and {Guoqiang Yu} and {Yue Wang 021}},
publisher = {IEEE},
booktitle = {2014 IEEE Global Conference on Signal and Information Processing, GlobalSIP 2014, Atlanta, GA, USA, December 3-5, 2014}
}
@inproceedings{conf/globalsip/WangBWMHY14,
title = {Predicting age at loss of ambulation in Duchenne muscular dystrophy with deep phenotypic measures.},
year = {2014},
booktitle = {GlobalSIP},
author = {{Yinxue Wang} and {Luca Bello} and {Yue Wang 021} and {Craig M. McDonald} and {Eric P. Hoffman} and {Guoqiang Yu}},
publisher = {IEEE},
booktitle = {2014 IEEE Global Conference on Signal and Information Processing, GlobalSIP 2014, Atlanta, GA, USA, December 3-5, 2014}
}
@inproceedings{conf/globalsip/YuWWWW14,
title = {A feasible roadmap to identifying significant intercellular genomic heterogeneity in deep sequencing data.},
year = {2014},
booktitle = {GlobalSIP},
author = {{Guoqiang Yu} and {Niya Wang} and {Roger R. Wang} and {Sean S. Wang} and {Yue Wang 021}},
publisher = {IEEE},
booktitle = {2014 IEEE Global Conference on Signal and Information Processing, GlobalSIP 2014, Atlanta, GA, USA, December 3-5, 2014}
}
@inproceedings{conf/icassp/WanMZWK14,
title = {Ensemble random projection for multi-label classification with application to protein subcellular localization.},
year = {2014},
booktitle = {ICASSP},
author = {{Shibiao Wan} and {Man-Wai Mak} and {Bai Zhang} and {Yue Joseph Wang} and {Sun-Yuan Kung}},
publisher = {IEEE},
booktitle = {IEEE International Conference on Acoustics, Speech and Signal Processing, ICASSP 2014, Florence, Italy, May 4-9, 2014}
}
@article{journals/bioinformatics/GuXRCWC14,
title = {Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic.},
year = {2014},
journal = {Bioinform.},
author = {{Jinghua Gu} and {Jianhua Xuan} and {Rebecca B. Riggins} and {Li Chen 018} and {Yue Joseph Wang} and {Robert Clarke}}
}
@article{journals/bioinformatics/ZhangHYSZCWFMWY14,
title = {AISAIC: a software suite for accurate identification of significant aberrations in cancers.},
year = {2014},
journal = {Bioinform.},
author = {{Bai Zhang} and {Xuchu Hou} and {Xiguo Yuan} and {Ie-Ming Shih} and {Zhen Zhang} and {Robert Clarke} and {Roger R. Wang} and {Yi Fu} and {Subha Madhavan} and {Yue Joseph Wang} and {Guoqiang Yu}}
}
@article{journals/bmcsb/TianZHCZSXHW14,
title = {Knowledge-fused differential dependency network models for detecting significant rewiring in biological networks.},
year = {2014},
journal = {BMC Syst. Biol.},
author = {{Ye Tian} and {Bai Zhang} and {Eric P. Hoffman} and {Robert Clarke} and {Zhen Zhang} and {Ie-Ming Shih} and {Jianhua Xuan} and {David M. Herrington} and {Yue Joseph Wang}}
}
@article{journals/corr/ZhaoXW14,
title = {A feasible roadmap for developing volumetric probability atlas of localized prostate cancer.},
year = {2014},
journal = {CoRR},
author = {{Liang Zhao} and {Jianhua Xuan} and {Yue Wang 021}}
}
@article{journals/tcbb/TianWZRPSCAYYCWZWA14,
title = {Integration of Network Biology and Imaging to Study Cancer Phenotypes and Responses.},
year = {2014},
journal = {IEEE ACM Trans. Comput. Biol. Bioinform.},
author = {{Ye Tian} and {Sean S. Wang} and {Zhen Zhang} and {Olga C. Rodriguez} and {Emanuel Petricoin III} and {Ie-Ming Shih} and {Daniel Chan} and {Maria Avantaggiati} and {Guoqiang Yu} and {Shaozhen Ye} and {Robert Clarke} and {Chao Wang 005} and {Bai Zhang} and {Yue Joseph Wang} and {Chris Albanese}}
}
@inproceedings{conf/iconip/TareefSCHWFC15,
title = {Learning Shape-Driven Segmentation Based on Neural Network and Sparse Reconstruction Toward Automated Cell Analysis of Cervical Smears.},
year = {2015},
booktitle = {ICONIP (1)},
author = {{Afaf Tareef} and {Yang Song 001} and {Weidong Cai 001} and {Heng Huang} and {Yue Wang 021} and {Dagan Feng 001} and {Mei Chen}},
publisher = {Springer},
booktitle = {Neural Information Processing - 22nd International Conference, ICONIP 2015, Istanbul, Turkey, November 9-12, 2015, Proceedings, Part I}
}
@article{journals/bioinformatics/ShiBCSHCWX15,
title = {BMRF-Net: a software tool for identification of protein interaction subnetworks by a bagging Markov random field-based method.},
year = {2015},
journal = {Bioinform.},
author = {{Xu Shi} and {Robert O. Barnes} and {Li Chen 018} and {Ayesha N. Shajahan-Haq} and {Leena Hilakivi-Clarke} and {Robert Clarke} and {Yue Joseph Wang} and {Jianhua Xuan}}
}
@article{journals/bioinformatics/TianZHCZSXHW15,
title = {KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring.},
year = {2015},
journal = {Bioinform.},
author = {{Ye Tian} and {Bai Zhang} and {Eric P. Hoffman} and {Robert Clarke} and {Zhen Zhang} and {Ie-Ming Shih} and {Jianhua Xuan} and {David M. Herrington} and {Yue Joseph Wang}}
}
@article{journals/bioinformatics/WangGCCSZLXW15,
title = {UNDO: a Bioconductor R package for unsupervised deconvolution of mixed gene expressions in tumor samples.},
year = {2015},
journal = {Bioinform.},
author = {{Niya Wang} and {Ting Gong} and {Robert Clarke} and {Lulu Chen} and {Ie-Ming Shih} and {Zhen Zhang} and {Douglas A. Levine} and {Jianhua Xuan} and {Yue Joseph Wang}}
}
@article{journals/bmcbi/RanjbarPWR15,
title = {SIMAT: GC-SIM-MS data analysis tool.},
year = {2015},
journal = {BMC Bioinform.},
author = {{Mohammad R. Nezami Ranjbar} and {Cristina Di Poto} and {Yue Joseph Wang} and {Habtom W. Ressom}}
}
@article{journals/mia/SongCHZWF15,
title = {Locality-constrained Subcluster Representation Ensemble for lung image classification.},
year = {2015},
journal = {Medical Image Anal.},
author = {{Yang Song 001} and {Tom Weidong Cai} and {Heng Huang} and {Yun Zhou 006} and {Yue Wang 021} and {David Dagan Feng}}
}
@article{journals/tcbb/RanjbarTWR15,
title = {Bayesian Normalization Model for Label-Free Quantitative Analysis by LC-MS.},
year = {2015},
journal = {IEEE ACM Trans. Comput. Biol. Bioinform.},
author = {{Mohammad R. Nezami Ranjbar} and {Mahlet G. Tadesse} and {Yue Joseph Wang} and {Habtom W. Ressom}}
}
@article{journals/tmi/SongCHZFWFC15,
title = {Large Margin Local Estimate With Applications to Medical Image Classification.},
year = {2015},
journal = {IEEE Trans. Medical Imaging},
author = {{Yang Song 001} and {Tom Weidong Cai} and {Heng Huang} and {Yun Zhou 006} and {David Dagan Feng} and {Yue Wang 021} and {Michael J. Fulham} and {Mei Chen}}
}
@inproceedings{conf/isbi/SongCZHFWC16,
title = {Texture analysis of tissue aging using global and cluster constrained local coding.},
year = {2016},
booktitle = {ISBI},
author = {{Yang Song 001} and {Weidong Cai 001} and {Fan Zhang 013} and {Heng Huang} and {David Dagan Feng} and {Yue Wang 021} and {Mei Chen}},
publisher = {IEEE},
booktitle = {13th IEEE International Symposium on Biomedical Imaging, ISBI 2016, Prague, Czech Republic, April 13-16, 2016}
}
@inproceedings{conf/isbi/TareefSCWFC16,
title = {Automatic nuclei and cytoplasm segmentation of leukocytes with color and texture-based image enhancement.},
year = {2016},
booktitle = {ISBI},
author = {{Afaf Tareef} and {Yang Song 001} and {Tom Weidong Cai} and {Yue Wang 021} and {David Dagan Feng} and {Mei Chen}},
publisher = {IEEE},
booktitle = {13th IEEE International Symposium on Biomedical Imaging, ISBI 2016, Prague, Czech Republic, April 13-16, 2016}
}
@inproceedings{conf/isbi/WangS0WBWTY16,
title = {FASP: A machine learning approach to functional astrocyte phenotyping from time-lapse calcium imaging data.},
year = {2016},
booktitle = {ISBI},
author = {{Yinxue Wang} and {Guilai Shi} and {David J. Miller 001} and {Yizhi Wang} and {Gerard Broussard} and {Yue Wang 021} and {Lin Tian} and {Guoqiang Yu}},
publisher = {IEEE},
booktitle = {13th IEEE International Symposium on Biomedical Imaging, ISBI 2016, Prague, Czech Republic, April 13-16, 2016}
}
@inproceedings{conf/nips/Wang0PWTY16,
title = {Graphical Time Warping for Joint Alignment of Multiple Curves.},
year = {2016},
booktitle = {NIPS},
author = {{Yizhi Wang} and {David J. Miller 001} and {Kira Poskanzer} and {Yue Wang 021} and {Lin Tian} and {Guoqiang Yu}},
booktitle = {Advances in Neural Information Processing Systems 29: Annual Conference on Neural Information Processing Systems 2016, December 5-10, 2016, Barcelona, Spain}
}
@article{journals/bmcbi/SongCHFWC16,
title = {Bioimage classification with subcategory discriminant transform of high dimensional visual descriptors.},
year = {2016},
journal = {BMC Bioinform.},
author = {{Yang Song 001} and {Weidong Cai 001} and {Heng Huang} and {Dagan Feng 001} and {Yue Wang 021} and {Mei Chen}}
}
@article{journals/cbm/YoussefCSWY16,
title = {Biologically inspired survival analysis based on integrating gene expression as mediator with genomic variants.},
year = {2016},
journal = {Comput. Biol. Medicine},
author = {{Ibrahim Youssef} and {Robert Clarke} and {Ie-Ming Shih} and {Yue Joseph Wang} and {Guoqiang Yu}}
}
@article{journals/tbe/AmbikapathiCLYC16,
title = {Convex-Optimization-Based Compartmental Pharmacokinetic Analysis for Prostate Tumor Characterization Using DCE-MRI.},
year = {2016},
journal = {IEEE Trans. Biomed. Eng.},
author = {{Arul-Murugan Ambikapathi} and {Tsung-Han Chan} and {Chia-Hsiang Lin} and {Fei-Shih Yang} and {Chong-Yung Chi} and {Yue Wang 021}}
}
@article{journals/fini/WangSMWWBWTY17,
title = {Automated Functional Analysis of Astrocytes from Chronic Time-Lapse Calcium Imaging Data.},
year = {2017},
journal = {Frontiers Neuroinformatics},
author = {{Yinxue Wang} and {Guilai Shi} and {David J. Miller 001} and {Yizhi Wang} and {Congchao Wang} and {Gerard Broussard} and {Yue Wang 021} and {Lin Tian} and {Guoqiang Yu}}
}
@article{journals/ijon/TareefSCHCWFFC17,
title = {Automatic segmentation of overlapping cervical smear cells based on local distinctive features and guided shape deformation.},
year = {2017},
journal = {Neurocomputing},
author = {{Afaf Tareef} and {Yang Song 001} and {Weidong Cai 001} and {Heng Huang} and {Hang Chang} and {Yue Wang 021} and {Michael J. Fulham} and {Dagan Feng 001} and {Mei Chen}}
}
@article{journals/ijon/TareefSHWFCC17,
title = {Optimizing the cervix cytological examination based on deep learning and dynamic shape modeling.},
year = {2017},
journal = {Neurocomputing},
author = {{Afaf Tareef} and {Yang Song 001} and {Heng Huang} and {Yue Wang 021} and {Dagan Feng 001} and {Mei Chen} and {Weidong Cai 001}}
}
@article{journals/mia/SongLZHFWCC17,
title = {Dual discriminative local coding for tissue aging analysis.},
year = {2017},
journal = {Medical Image Anal.},
author = {{Yang Song 001} and {Qing Li 012} and {Fan Zhang 013} and {Heng Huang} and {Dagan Feng 001} and {Yue Wang 021} and {Mei Chen} and {Weidong Cai 001}}
}
@inproceedings{conf/isbi/WangAWKY18,
title = {Detection and tracking of migrating oligodendrocyte progenitor cells from in vivo fluorescence time-lapse imaging data.},
year = {2018},
booktitle = {ISBI},
author = {{Yinxue Wang} and {Maria Ali} and {Yue Joseph Wang} and {Sarah Kucenas} and {Guoqiang Yu}},
publisher = {IEEE},
booktitle = {15th IEEE International Symposium on Biomedical Imaging, ISBI 2018, Washington, DC, USA, April 4-7, 2018}
}
@inproceedings{conf/isbi/Zhang0LFWC18,
title = {Nuclei instance segmentation with dual contour-enhanced adversarial network.},
year = {2018},
booktitle = {ISBI},
author = {{Donghao Zhang} and {Yang Song 001} and {Siqi Liu 001} and {Dagan Feng 001} and {Yue Wang 021} and {Weidong Cai 001}},
publisher = {IEEE},
booktitle = {15th IEEE International Symposium on Biomedical Imaging, ISBI 2018, Washington, DC, USA, April 4-7, 2018}
}
@article{journals/siamis/LinWMCW18,
title = {Maximum Volume Inscribed Ellipsoid: A New Simplex-Structured Matrix Factorization Framework via Facet Enumeration and Convex Optimization.},
year = {2018},
journal = {SIAM J. Imaging Sci.},
author = {{Chia-Hsiang Lin} and {Ruiyuan Wu} and {Wing-Kin Ma} and {Chong-Yung Chi} and {Yue Wang 021}}
}
@article{journals/tmi/TareefSHFCWC18,
title = {Multi-Pass Fast Watershed for Accurate Segmentation of Overlapping Cervical Cells.},
year = {2018},
journal = {IEEE Trans. Medical Imaging},
author = {{Afaf Tareef} and {Yang Song 001} and {Heng Huang} and {Dagan Feng 001} and {Mei Chen} and {Yue Wang 021} and {Weidong Cai 001}}
}
@article{journals/tnn/LinCCMW18,
title = {Detection of Sources in Non-Negative Blind Source Separation by Minimum Description Length Criterion.},
year = {2018},
journal = {IEEE Trans. Neural Networks Learn. Syst.},
author = {{Chia-Hsiang Lin} and {Chong-Yung Chi} and {Lulu Chen} and {David J. Miller 001} and {Yue Wang 021}}
}
@inproceedings{conf/isbi/WangZSLWFPC19,
title = {Segmenting Neuronal Structure in 3D Optical Microscope Images via Knowledge Distillation with Teacher-Student Network.},
year = {2019},
booktitle = {ISBI},
author = {{Heng Wang 007} and {Donghao Zhang} and {Yang Song 001} and {Siqi Liu 001} and {Yue Wang 021} and {Dagan Feng 001} and {Hanchuan Peng} and {Weidong Cai 001}},
publisher = {IEEE},
booktitle = {16th IEEE International Symposium on Biomedical Imaging, ISBI 2019, Venice, Italy, April 8-11, 2019}
}
@article{journals/bmcbi/RuanLSWYY19,
title = {DBS: a fast and informative segmentation algorithm for DNA copy number analysis.},
year = {2019},
journal = {BMC Bioinform.},
author = {{Jun Ruan} and {Zhen Liu} and {Ming Sun} and {Yue Wang 021} and {Junqiu Yue} and {Guoqiang Yu}}
}
@article{journals/bioinformatics/ChenWWHCW20,
title = {debCAM: a bioconductor R package for fully unsupervised deconvolution of complex tissues.},
year = {2020},
journal = {Bioinform.},
author = {{Lulu Chen} and {Chiung-Ting Wu} and {Niya Wang} and {David M. Herrington} and {Robert Clarke} and {Yue Wang 021}}
}
@article{journals/bioinformatics/WangWRBWSLWWTY20,
title = {SynQuant: an automatic tool to quantify synapses from microscopy images.},
year = {2020},
journal = {Bioinform.},
author = {{Yizhi Wang} and {Congchao Wang} and {Petter Ranefall} and {Gerard Broussard} and {Yinxue Wang} and {Guilai Shi} and {Boyu Lyu} and {Chiung-Ting Wu} and {Yue Wang 021} and {Lin Tian} and {Guoqiang Yu}}
}
@article{journals/bioinformatics/WuWWEKGPHWY20,
title = {Targeted realignment of LC-MS profiles by neighbor-wise compound-specific graphical time warping with misalignment detection.},
year = {2020},
journal = {Bioinform.},
author = {{Chiung-Ting Wu} and {Yizhi Wang} and {Yinxue Wang} and {Timothy M. D. Ebbels} and {Ibrahim Karaman} and {Gonçalo Graça} and {Rui Pinto} and {David M. Herrington} and {Yue Wang 021} and {Guoqiang Yu}}
}
@article{journals/natmi/WangH21,
title = {Machine intelligence enabled radiomics.},
year = {2021},
journal = {Nat. Mach. Intell.},
author = {{Yue Wang 021} and {David M. Herrington}}
}
@article{journals/bioinformatics/ChenWLDLCYEHW22,
title = {swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution.},
year = {2022},
journal = {Bioinform.},
author = {{Lulu Chen} and {Chiung-Ting Wu} and {Chia-Hsiang Lin} and {Rujia Dai} and {Chunyu Liu 001} and {Robert Clarke} and {Guoqiang Yu} and {Jennifer E. Van Eyk} and {David M. Herrington} and {Yue Wang 021}}
}
@article{journals/bioinformatics/WuDCDLYBPZCHW24,
title = {CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution.},
year = {2024},
month = {March},
journal = {Bioinform.},
author = {{Chiung-Ting Wu} and {Dongping Du} and {Lulu Chen} and {Rujia Dai} and {Chunyu Liu 001} and {Guoqiang Yu} and {Saurabh Bhardwaj} and {Sarah J. Parker} and {Zhen Zhang} and {Robert Clarke} and {David M. Herrington} and {Yue Wang 021}}
}