A Novel Fuzzy-Based MOPSO Algorithm for Identifying Clusters From Complex Networks. - Yue Yang 035; Xiaorui Su 001; Bowei Zhao; Yizhou He; Lun Hu (ICTAI, 2022)

RLFDDA: a meta-path based graph representation learning model for drug-disease association prediction. - Menglong Zhang; Bo-Wei Zhao; Xiao-Rui Su 001; Yi-Zhou He; Yue Yang 035; Lun Hu (BMC Bioinform., 2022)

Learning RNA sequence patterns to interpretably identify m6A modification sites. - Guodong Li; Bowei Zhao; Xiaorui Su 001; Yue Yang 035; Pengwei Hu 001; Lun Hu (BIBM, 2023)

Drug Repositioning Method Based on Pre-trained Large Model and Network Embedding Representation. - Dongxu Li; Bowei Zhao; Xiaorui Su 001; Guodong Li; Yue Yang 035; Pengwei Hu 001; Lun Hu (ICDM (Workshops), 2023)

Multi-level Subgraph Representation Learning for Drug-Disease Association Prediction Over Heterogeneous Biological Information Network. - Bo-Wei Zhao; Xiao-Rui Su 001; Yue Yang 035; Dong-Xu Li; Peng-Wei Hu 001; Zhu-Hong You; Lun Hu (ICIC (3), 2023)

PPISB: A Novel Network-Based Algorithm of Predicting Protein-Protein Interactions With Mixed Membership Stochastic Blockmodel. - Xiaojuan Wang; Wen Yang; Yue Yang 035; Yizhou He; Jun Zhang 003; Lusheng Wang 001; Lun Hu (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

Incorporating higher order network structures to improve miRNA-disease association prediction based on functional modularity. - Yi-Zhou He; Yue Yang 035; Xiao-Rui Su 001; Bo-Wei Zhao; Shengwu Xiong 001; Lun Hu (Briefings Bioinform., 2023)

FCAN-MOPSO: An Improved Fuzzy-Based Graph Clustering Algorithm for Complex Networks With Multiobjective Particle Swarm Optimization. - Lun Hu; Yue Yang 035; Zehai Tang; Yizhou He; Xin Luo 001 (IEEE Trans. Fuzzy Syst., 2023)

A Multi-view Nested Contrastive Learning Framework for Predicting Drug-Drug Interaction Events. - Dongxu Li; Yue Yang 035; Guodong Li; Pengwei Hu 001; Lun Hu (BIBM, 2024)

Knowledge-guided Protein Complex Identification with Fuzzy-based Graph Representation Learning. - Yue Yang 035; Guodong Li; Dongxu Li; Pengwei Hu 001; Lun Hu (BIBM, 2024)

Fuzzy-Based Deep Attributed Graph Clustering. - Yue Yang 035; Xiaorui Su 001; Bowei Zhao; GuoDong Li; Pengwei Hu 001; Jun Zhang 003; Lun Hu (IEEE Trans. Fuzzy Syst., 2024)

Discovering Consensus Regions for Interpretable Identification of RNA N6-Methyladenosine Modification Sites via Graph Contrastive Clustering. - Guodong Li; Bowei Zhao; Xiaorui Su 001; Yue Yang 035; Pengwei Hu 001; Xi Zhou; Lun Hu (IEEE J. Biomed. Health Informatics, 2024)

Motif-Aware miRNA-Disease Association Prediction via Hierarchical Attention Network. - Bo-Wei Zhao; Yi-Zhou He; Xiao-Rui Su 001; Yue Yang 035; Guo-Dong Li; Yu-An Huang; Peng-Wei Hu 001; Zhu-Hong You; Lun Hu (IEEE J. Biomed. Health Informatics, 2024)

Learning Sequential and Structural Dependencies Between Nucleotides for RNA N6-Methyladenosine Site Identification. - Guodong Li; Bowei Zhao; Xiaorui Su 001; Dong-Xu Li; Yue Yang 035; Zhi Zeng; Lun Hu (IEEE CAA J. Autom. Sinica, 2024)

Capturing short-range and long-range dependencies of nucleotides for identifying RNA N6-methyladenosine modification sites. - Guodong Li; Bowei Zhao; Xiao-Rui Su 001; Yue Yang 035; Zhi Zeng; Pengwei Hu 001; Lun Hu (Comput. Biol. Medicine, 2025)

Regulation-aware graph learning for drug repositioning over heterogeneous biological network. - Bo-Wei Zhao; Xiao-Rui Su 001; Yue Yang 035; Dong-Xu Li; Guo-Dong Li; Peng-Wei Hu 001; Zhu-Hong You; Xin Luo 001; Lun Hu (Inf. Sci., 2025)

A bijective inference network for interpretable identification of RNA N6-methyladenosine modification sites. - Guodong Li; Yue Yang 035; Dongxu Li; Xiao-Rui Su 001; Zhi Zeng; Pengwei Hu 001; Lun Hu (Pattern Recognit., 2025)

Integrating Fuzzy Clustering and Graph Convolution Network to Accurately Identify Clusters From Attributed Graph. - Yue Yang 035; Guodong Li; Dongxu Li; Jun Zhang 003; Pengwei Hu 001; Lun Hu (IEEE Trans. Netw. Sci. Eng., 2025)

Link-Based Attributed Graph Clustering via Approximate Generative Bayesian Learning. - Yue Yang 035; Lun Hu; Guodong Li; Dongxu Li; Pengwei Hu 001; Xin Luo 001 (IEEE Trans. Syst. Man Cybern. Syst., 2025)

FMvPCI: A Multiview Fusion Neural Network for Identifying Protein Complex via Fuzzy Clustering. - Yue Yang 035; Lun Hu; Guodong Li; Dongxu Li; Pengwei Hu 001; Xin Luo 001 (IEEE Trans. Syst. Man Cybern. Syst., 2025)