Gene selection for Brain Cancer Classification. - Yuk Yee Leung; Chunqi Chang; Y. S. Hung; Peter Chin Wan Fung (EMBC, 2006)

A Multiple-Filter-Multiple-Wrapper Approach to Gene Selection and Microarray Data Classification. - Yukyee Leung; Yeung Sam Hung (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

Invited: Multiclass RNA function classification using next-generation sequencing. - Paul Ryvkin; Yuk Yee Leung; Li-San Wang; Brian D. Gregory (ICCABS, 2011)

DASHR: database of small human noncoding RNAs. - Yuk Yee Leung; Pavel P. Kuksa; Alexandre Amlie-Wolf; Otto Valladares; Lyle H. Ungar; Sampath Kannan; Brian D. Gregory; Li-San Wang (Nucleic Acids Res., 2016)

Functional annotation of genomic variants in studies of late-onset Alzheimer's disease. - Mariusz Butkiewicz; Elizabeth E. Blue; Yuk Yee Leung; Xueqiu Jian; Edoardo Marcora; Alan E. Renton; Amanda Kuzma; Li-San Wang; Daniel C. Koboldt; Jonathan L. Haines; William S. Bush (Bioinform., 2018)

SPAR: small RNA-seq portal for analysis of sequencing experiments. - Pavel P. Kuksa; Alexandre Amlie-Wolf; Zivadin Katanic; Otto Valladares; Li-San Wang; Yuk Yee Leung (Nucleic Acids Res., 2018)

DASHR 2.0: integrated database of human small non-coding RNA genes and mature products. - Pavel P. Kuksa; Alexandre Amlie-Wolf; Zivadin Katanic; Otto Valladares; Li-San Wang; Yuk Yee Leung (Bioinform., 2019)

VCPA: genomic variant calling pipeline and data management tool for Alzheimer's Disease Sequencing Project. - Yuk Yee Leung; Otto Valladares; Yi-Fan Chou; Han-Jen Lin; Amanda Kuzma; Laura Cantwell; Liming Qu; Prabhakaran Gangadharan; William J. Salerno; Gerard D. Schellenberg; Li-San Wang (Bioinform., 2019)

VCPA: genomic variant calling pipeline and data management tool for Alzheimer's Disease Sequencing Project. - Yuk Yee Leung; Otto Valladares; Yi-Fan Chou; Han-Jen Lin; Amanda Kuzma; Laura Cantwell; Liming Qu; William J. Salerno; Gerard D. Schellenberg; Li-San Wang (Bioinform., 2019)

SparkINFERNO: a scalable high-throughput pipeline for inferring molecular mechanisms of non-coding genetic variants. - Pavel P. Kuksa; Chien-Yueh Lee; Alexandre Amlie-Wolf; Prabhakaran Gangadharan; Elizabeth E. Mlynarski; Yi-Fan Chou; Han-Jen Lin; Heather Issen; Emily Greenfest-Allen; Otto Valladares; Yuk Yee Leung; Li-San Wang (Bioinform., 2020)

Omnibus and robust deconvolution scheme for bulk RNA sequencing data integrating multiple single-cell reference sets and prior biological knowledge. - Chixiang Chen; Yuk Yee Leung; Matei Ionita; Li-San Wang; Mingyao Li (Bioinform., 2022)

hipFG: high-throughput harmonization and integration pipeline for functional genomics data. - Jeffrey Cifello; Pavel P. Kuksa; Naveensri Saravanan; Otto Valladares; Li-San Wang; Yuk Yee Leung (Bioinform., 2023)