Boosting Similar Compounds Searches via Correlated Subgraph Analysis. - Yuma Naoi; Hiroaki Shiokawa (iiWAS, 2023)

Fast Correlated DNA Subsequence Search via Graph-Based Representation. - Ryuichi Yagi; Yuma Naoi; Hiroaki Shiokawa (iiWAS, 2023)

Efficient Correlated Subgraph Searches for AI-powered Drug Discovery. - Hiroaki Shiokawa; Yuma Naoi; Shohei Matsugu (IJCAI, 2024)