Efficient conformational ensemble generation of protein-bound peptides. - Yumeng Yan; Di Zhang; Sheng-You Huang (J. Cheminformatics, 2017)

HDOCK: a web server for protein-protein and protein-DNA/RNA docking based on a hybrid strategy. - Yumeng Yan; Di Zhang; Pei Zhou; Botong Li; Sheng-You Huang (Nucleic Acids Res., 2017)

Protein-Protein Docking with Improved Shape Complementarity. - Yumeng Yan; Sheng-You Huang (ICIC (1), 2018)

RRDB: a comprehensive and non-redundant benchmark for RNA-RNA docking and scoring. - Yumeng Yan; Sheng-You Huang (Bioinform., 2018)

Hierarchical Flexible Peptide Docking by Conformer Generation and Ensemble Docking of Peptides. - Pei Zhou; Botong Li; Yumeng Yan; Bowen Jin; Libang Wang; Sheng-You Huang (J. Chem. Inf. Model., 2018)

HSYMDOCK: a docking web server for predicting the structure of protein homo-oligomers with Cn or Dn symmetry. - Yumeng Yan; Huanyu Tao; Sheng-You Huang (Nucleic Acids Res., 2018)

A non-redundant benchmark for symmetric protein docking. - Yumeng Yan; Sheng-You Huang (Big Data Min. Anal., 2019)

Pushing the accuracy limit of shape complementarity for protein-protein docking. - Yumeng Yan; Sheng-You Huang (BMC Bioinform., 2019)

Accurate prediction of inter-protein residue-residue contacts for homo-oligomeric protein complexes. - Yumeng Yan; Sheng-You Huang (Briefings Bioinform., 2021)

Inclusion of Desolvation Energy into Protein-Protein Docking through Atomic Contact Potentials. - Hao Li; Yumeng Yan; Xuejun Zhao; Sheng-You Huang (J. Chem. Inf. Model., 2022)

NFC-IDS: An Intrusion Detection System Based on RF Signals for NFC Security. - Yuwei Yang; Yijie Xun; Yumeng Yan; Jiajia Liu 001; Ziteng Jin (IWCMC, 2023)

DeepHomo2.0: improved protein-protein contact prediction of homodimers by transformer-enhanced deep learning. - Peicong Lin; Yumeng Yan; Sheng-You Huang (Briefings Bioinform., 2023)

Distance-reconstructed dependency enhanced aspect-based sentiment analysis with sentiment strength. - Mingming Kong; Le Feng; Chao Zhang; Fei Hao; Yumeng Yan (Neurocomputing, 2024)

The style transfer model of illustration images based on multi-scale CycleGAN. - Yanran Liang; Yumeng Yan (Int. J. Inf. Commun. Technol., 2025)