Comparability and reproducibility of biomedical data. - Yunda Huang; Raphael Gottardo (Briefings Bioinform., 2013)

Mathematical modeling to reveal breakthrough mechanisms in the HIV Antibody Mediated Prevention (AMP) trials. - Daniel B. Reeves; Yunda Huang; Elizabeth R. Duke; Bryan T. Mayer; E. Fabian Cardozo-Ojeda; Florencia A. Boshier; David A. Swan; Morgane Rolland; Merlin L. Robb; John R. Mascola; Myron S. Cohen; Lawrence Corey; et al. (PLoS Comput. Biol., 2020)

Optimizing clinical dosing of combination broadly neutralizing antibodies for HIV prevention. - Bryan T. Mayer; Allan C. deCamp; Yunda Huang; Joshua T. Schiffer; Raphael Gottardo; Peter B. Gilbert; Daniel B. Reeves (PLoS Comput. Biol., 2022)

Putting computational models of immunity to the test - An invited challenge to predict B.pertussis vaccination responses. - Pramod Shinde; Lisa Willemsen; Michael Anderson; Minori Aoki; Saonli Basu; Julie G. Burel; Peng Cheng; Souradipto Ghosh Dastidar; Aidan Dunleavy; Tal Einav; Jamie Forschmiedt; Slim Fourati; et al. (PLoS Comput. Biol., 2025)