Improved protein contact prediction using dimensional hybrid residual networks and singularity enhanced loss function. - Yunda Si; Chengfei Yan (Briefings Bioinform., 2021)

Protein complex structure prediction powered by multiple sequence alignments of interologs from multiple taxonomic ranks and AlphaFold2. - Yunda Si; Chengfei Yan (Briefings Bioinform., 2022)

A reproducibility analysis-based statistical framework for residue-residue evolutionary coupling detection. - Yunda Si; Yi Zhang; Chengfei Yan (Briefings Bioinform., 2022)

Improved inter-protein contact prediction using dimensional hybrid residual networks and protein language models. - Yunda Si; Chengfei Yan (Briefings Bioinform., 2023)