Systematic evaluation of cell-type deconvolution pipelines for sequencing-based bulk DNA methylomes. - Yunhee Jeong; Lisa Barros de Andrade e Sousa; Dominik Thalmeier; Reka Toth; Marlene Ganslmeier; Kersten Breuer; Christoph Plass; Pavlo Lutsik (Briefings Bioinform., 2022)

Cell-type deconvolution model for read-level DNA methylomes - Yunhee Jeong (2024)

scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data. - Yunhee Jeong; Jonathan Ronen; Wolfgang Kopp; Pavlo Lutsik; Altuna Akalin (BMC Bioinform., 2024)