Stubb: a program for discovery and analysis of cis-regulatory modules. - Saurabh Sinha; Yupu Liang; Eric D. Siggia (Nucleic Acids Res., 2006)

Clustering Tandem Repeats via Trinucleotides. - Yupu Liang; Dina Sokol; Sarah Zelikovitz (ICDM Workshops, 2012)

Classification of Tandem Repeats in the Human Genome. - Yupu Liang; Dina Sokol; Sarah Zelikovitz; Sarah Ita Levitan (Int. J. Knowl. Discov. Bioinform., 2012)

Analysis Of DNA Motifs In The Human Genome. - Yupu Liang (2014)

LayoutDIT: Layout-Aware End-to-End Document Image Translation with Multi-Step Conductive Decoder. - Zhiyang Zhang; Yaping Zhang; Yupu Liang; Lu Xiang; Yang Zhao 007; Yu Zhou 001; Chengqing Zong (EMNLP (Findings), 2023)

Born a BabyNet with Hierarchical Parental Supervision for End-to-End Text Image Machine Translation. - Cong Ma 002; Yaping Zhang; Zhiyang Zhang; Yupu Liang; Yang Zhao 007; Yu Zhou 001; Chengqing Zong (LREC/COLING, 2024)

Document Image Machine Translation with Dynamic Multi-pre-trained Models Assembling. - Yupu Liang; Yaping Zhang; Cong Ma 002; Zhiyang Zhang; Yang Zhao 007; Lu Xiang; Chengqing Zong; Yu Zhou 001 (NAACL-HLT, 2024)

Single-to-mix Modality Alignment with Multimodal Large Language Model for Document Image Machine Translation. - Yupu Liang; Yaping Zhang; Zhiyang Zhang; Yang Zhao 007; Lu Xiang; Chengqing Zong; Yu Zhou 001 (ACL (1), 2025)

Improving MLLM's Document Image Machine Translation via Synchronously Self-reviewing Its OCR Proficiency. - Yupu Liang; Yaping Zhang; Zhiyang Zhang; Zhiyuan Chen; Yang Zhao 007; Lu Xiang; Chengqing Zong; Yu Zhou 001 (ACL (Findings), 2025)

A Query-Response Framework for Whole-Page Complex-Layout Document Image Translation with Relevant Regional Concentration. - Zhiyang Zhang; Yaping Zhang; Yupu Liang; Zhiyuan Chen; Lu Xiang; Yang Zhao 007; Yu Zhou 001; Chengqing Zong (ACL (Findings), 2025)

From Chaotic OCR Words to Coherent Document: A Fine-to-Coarse Zoom-Out Network for Complex-Layout Document Image Translation. - Zhiyang Zhang; Yaping Zhang; Yupu Liang; Lu Xiang; Yang Zhao 007; Yu Zhou 001; Chengqing Zong (COLING, 2025)

ICDAR 2025 Competition on End-to-End Document Image Machine Translation Towards Complex Layouts. - Yaping Zhang; Yupu Liang; Zhiyang Zhang; Zhiyuan Chen; Lu Xiang; Yang Zhao 007; Yu Zhou 001; Chengqing Zong (ICDAR (5), 2025)

MT3: Scaling MLLM-based Text Image Machine Translation via Multi-Task Reinforcement Learning. - Zhaopeng Feng; Yupu Liang; Shaosheng Cao; Jiayuan Su; Jiahan Ren; Zhe Xu; Yao Hu 002; Wenxuan Huang 001; Jian Wu; Zuozhu Liu (CoRR, 2025)

Understand Layout and Translate Text: Unified Feature-Conductive End-to-End Document Image Translation. - Zhiyang Zhang; Yaping Zhang; Yupu Liang; Cong Ma 002; Lu Xiang; Yang Zhao 007; Yu Zhou 001; Chengqing Zong (IEEE Trans. Pattern Anal. Mach. Intell., 2025)