DeepAVP: A Dual-Channel Deep Neural Network for Identifying Variable-Length Antiviral Peptides. - Jiawei Li; Yuqian Pu; Jijun Tang; Quan Zou 001; Fei Guo 001 (IEEE J. Biomed. Health Informatics, 2020)

DeepATT: a hybrid category attention neural network for identifying functional effects of DNA sequences. - Jiawei Li; Yuqian Pu; Jijun Tang; Quan Zou 001; Fei Guo 001 (Briefings Bioinform., 2021)

DeepFusionDTA: Drug-Target Binding Affinity Prediction With Information Fusion and Hybrid Deep-Learning Ensemble Model. - Yuqian Pu; Jiawei Li; Jijun Tang; Fei Guo 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

Pmf-cpi: assessing drug selectivity with a pretrained multi-functional model for compound-protein interactions. - Nan Song; Ruihan Dong; Yuqian Pu; Ercheng Wang; Junhai Xu; Fei Guo 001 (J. Cheminformatics, 2023)