CRISPRCasStack: a stacking strategy-based ensemble learning framework for accurate identification of Cas proteins. - Tianjiao Zhang; Yuran Jia; Hongfei Li; Dali Xu; Jie Zhou; Guohua Wang (Briefings Bioinform., 2022)

Complex genome assembly based on long-read sequencing. - Tianjiao Zhang; Jie Zhou; Wentao Gao; Yuran Jia; Yanan Wei; Guohua Wang (Briefings Bioinform., 2022)

THItoGene: a deep learning method for predicting spatial transcriptomics from histological images. - Yuran Jia; Junliang Liu; Li Chen; Tianyi Zhao; Yadong Wang (Briefings Bioinform., 2024)

HGGN: Prediction of microRNA-Mediated drug sensitivity based on interpretable heterogeneous graph global-attention network. - Junliang Liu; Xinbo Zhao; Yuran Jia; Sicong Wang; Tianyi Zhao (Future Gener. Comput. Syst., 2024)

CellContrast: Reconstructing spatial relationships in single-cell RNA sequencing data via deep contrastive learning. - Shumin Li; Jiajun Ma; Tianyi Zhao; Yuran Jia; Bo Liu; Ruibang Luo; Yuanhua Huang (Patterns, 2024)