Protein Conformation Motion Modeling Using Sep-CMA-ES. - Maxim Buzdalov 001; Sergey Knyazev; Yuri Porozov (ICMLA, 2014)

Coarse-grained model of protein interaction for bio-inspired nano-communication. - Sergey Knyazev; Sergey Tarakanov; Vladimir Kuznetsov; Yuri Porozov; Yevgeni Koucheryavy; Eugene O. Stepanov (ICUMT, 2014)

Na/K-ATPase Glutathionylation: in silico Modeling of Reaction Mechanisms. - Yaroslav V. Solovev; Daria S. Ostroverkhova; Gaik Tamazian; Anton V. Domnin; Anastasya A. Anashkina; Irina Yu. Petrushanko; Eugene O. Stepanov; Yuri B. Porozov (ISBRA, 2020)

The Cross-Interpretation of QSAR Toxicological Models. - Oleg Tinkov; Pavel G. Polishchuk; Veniamin Yu. Grigor'ev; Yuri Porozov (ISBRA, 2020)

Evolutionary Switches Structural Transitions via Coarse-Grained Models. - Francesco Delfino; Yuri Porozov; Eugene Stepanov; Gaik Tamazian; Valentina Tozzini (J. Comput. Biol., 2020)

Special Issue: 16th International Symposium on Bioinformatics Research and Applications (ISBRA 2020). - Zhipeng Cai 001; Pavel Skums; Yuri Porozov; Alexander Zelikovsky (J. Comput. Biol., 2021)

Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data. - Filipp Rondel; Roya Hosseini; Bikram Sahoo; Sergey Knyazev; Igor Mandric; Frank Stewart; Ion I. Mandoiu; Bogdan Pasaniuc; Yuri Porozov; Alexander Zelikovsky (J. Comput. Biol., 2021)

t-SNE Highlights Phylogenetic and Temporal Patterns of SARS-CoV-2 Spike and Nucleocapsid Protein Evolution. - Gaik Tamazian; Andrey B. Komissarov; Dmitry Kobak; Dmitry Polyakov; Evgeny Andronov; Sergei Nechaev; Sergey Kryzhevich; Yuri Porozov; Eugene Stepanov (ISBRA, 2022)

Implementation of machine learning protocols to predict the hydrolysis reaction properties of organophosphorus substrates using descriptors of electron density topology. - Vlada V. Petrova; Anton V. Domnin; Yuri B. Porozov; Pavel O. Kuliaev; Yaroslav V. Solovev (J. Comput. Chem., 2024)