Inverse Ubbelohde effect in the short hydrogen bond of photosystem II: Relation between H/D isotope effect and symmetry in potential energy profile. - Yusuke Kanematsu; Masanori Tachikawa; Yu Takano (J. Comput. Chem., 2016)

PyDISH: database and analysis tools for heme porphyrin distortion in heme proteins. - Hiroko X. Kondo; Yusuke Kanematsu; Gen Masumoto; Yu Takano (Database J. Biol. Databases Curation, 2020)

Global Analysis of Heme Proteins Elucidates the Correlation between Heme Distortion and the Heme-Binding Pocket. - Hiroko X. Kondo; Masanori Fujii; Takuma Tanioka; Yusuke Kanematsu; Takashi Yoshida; Yu Takano (J. Chem. Inf. Model., 2022)

Comprehensive Analysis of Deuterium Isotope Effects on Ionic H3O+...π Interactions Using Multi-Component Quantum Mechanics Methods. - Taro Udagawa; Yusuke Kanematsu; Takayoshi Ishimoto; Masanori Tachikawa (J. Comput. Chem., 2025)