A New Plug-In Software Architecture Applied for a Portable Molecular Structure Browser. - Yutaka Ueno; Kiyoshi Asai (ISMB, 1997)

GA-Based Inference of Euler Angles for Single Particle Analysis. - Shusuke Saeki; Kiyoshi Asai; Katsutoshi Takahashi; Yutaka Ueno; Katsunori Isono; Hitoshi Iba (GECCO, 2003)

Implementing a modeling software for animated protein-complex interactions using a physics simulation library. - Yutaka Ueno; Shuntaro Ito; Akihiko Konagaya (J. Bioinform. Comput. Biol., 2014)

A high-performance haptic rendering system for virtual reality molecular modeling. - Arif Pramudwiatmoko; Satoru Tsutoh; Gregory Gutmann; Yutaka Ueno; Akihiko Konagaya (Artif. Life Robotics, 2019)

Simulating dual-arm robot motions to avoid collision by rigid body dynamics for laboratory bench work. - Yutaka Ueno; Natsuki Miyata; Natsuki Yamanobe; Shungo Adachi; Totai Mitsuyama (Artif. Life Robotics, 2023)