UniEntrezDB: Large-scale Gene Ontology Annotation Dataset and Evaluation Benchmarks with Unified Entrez Gene Identifiers. - Yuwei Miao; Yuzhi Guo; Hehuan Ma; Jingquan Yan; Feng Jiang; Weizhi An; Jean Gao; Junzhou Huang (CoRR, 2024)

GoBERT: Gene Ontology Graph Informed BERT for Universal Gene Function Prediction. - Yuwei Miao; Yuzhi Guo; Hehuan Ma; Jingquan Yan; Feng Jiang; Rui Liao; Junzhou Huang (AAAI, 2025)