Improved bounds for the RIP of Subsampled Circulant matrices. - Meng Huang 002; Yuxuan Pang; Zhiqiang Xu 001 (CoRR, 2018)

A 3D Multi-scale Virtual Adversarial Network for False Positive Reduction in Pulmonary Nodule Detection. - Yunheng Wu; Yuxuan Pang; Peng Cao 001 (ICIAI, 2019)

Identifying anti-coronavirus peptides by incorporating different negative datasets and imbalanced learning strategies. - Yuxuan Pang; Zhuo Wang; Jhih-Hua Jhong; Tzong-Yi Lee (Briefings Bioinform., 2021)

AVPIden: a new scheme for identification and functional prediction of antiviral peptides based on machine learning approaches. - Yuxuan Pang; Lantian Yao; Jhih-Hua Jhong; Zhuo Wang; Tzong-Yi Lee (Briefings Bioinform., 2021)

UbiNet 2.0: a verified, classified, annotated and updated database of E3 ubiquitin ligase-substrate interactions. - Zhongyan Li; Siyu Chen; Jhih-Hua Jhong; Yuxuan Pang; Kai-Yao Huang; Shangfu Li; Tzong-Yi Lee (Database J. Biol. Databases Curation, 2021)

dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data. - Jhih-Hua Jhong; Lantian Yao; Yuxuan Pang; Zhongyan Li; Chia-Ru Chung; Rulan Wang; Shangfu Li; Wenshuo Li; Mengqi Luo; Renfei Ma; Yuqi Huang; Xiaoning Zhu; et al. (Nucleic Acids Res., 2022)

dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications. - Zhongyan Li; Shangfu Li; Mengqi Luo; Jhih-Hua Jhong; Wenshuo Li; Lantian Yao; Yuxuan Pang; Zhuo Wang; Rulan Wang; Renfei Ma; Jinhan Yu; Yuqi Huang; et al. (Nucleic Acids Res., 2022)

Integrating transformer and imbalanced multi-label learning to identify antimicrobial peptides and their functional activities. - Yuxuan Pang; Lantian Yao; Jingyi Xu; Zhuo Wang; Tzong-Yi Lee (Bioinform., 2022)

Extraction of microRNA-target interaction sentences from biomedical literature by deep learning approach. - Mengqi Luo; Shangfu Li; Yuxuan Pang; Lantian Yao; Renfei Ma; Hsi-Yuan Huang; Hsien-Da Huang; Tzong-Yi Lee (Briefings Bioinform., 2023)

A risk assessment framework for multidrug-resistant Staphylococcus aureus using machine learning and mass spectrometry technology. - Zhuo Wang; Yuxuan Pang; Chia-Ru Chung; Hsin-Yao Wang; Haiyan Cui; Ying-Chih Chiang; Jorng-Tzong Horng; Jang-Jih Lu; Tzong-Yi Lee (Briefings Bioinform., 2023)

STForte: tissue context-specific encoding and consistency-aware spatial imputation for spatially resolved transcriptomics. - Yuxuan Pang; Chunxuan Wang; Yao-zhong Zhang; Zhuo Wang; Seiya Imoto; Tzong-Yi Lee (Briefings Bioinform., 2024)

CapsEnhancer: An Effective Computational Framework for Identifying Enhancers Based on Chaos Game Representation and Capsule Network. - Lantian Yao; Peilin Xie; Jiahui Guan; Chia-Ru Chung; Yixian Huang; Yuxuan Pang; Huacong Wu; Ying-Chih Chiang; Tzong-Yi Lee (J. Chem. Inf. Model., 2024)

A novel hypergraph model for identifying and prioritizing personalized drivers in cancer. - Naiqian Zhang; Fubin Ma; Dong Guo; Yuxuan Pang; Chenye Wang; Yusen Zhang 002; Xiaoqi Zheng; Mingyi Wang (PLoS Comput. Biol., 2024)