Multiple Alignment of Biological Networks: A Flexible Approach. - Yves-Pol Deniélou; Frédéric Boyer; Alain Viari; Marie-France Sagot (CPM, 2009)

Alignement Multiple de Données Génomiques et Post-Génomiques : Approches Algorithmiques. (Multiple Alignment of Genomic and Post-Genomic Data : Algorithmical Approaches). - Yves-Pol Deniélou (2010)

Bacterial syntenies: an exact approach with gene quorum. - Yves-Pol Deniélou; Marie-France Sagot; Frédéric Boyer; Alain Viari (BMC Bioinform., 2011)