MENTHOR, a database system for the storage and retrieval of three-dimensional molecular structures and associated data searchable by substructural, biologic, physical, or geometric properties. - Yvonne C. Martin; Elizabeth B. Danaher; Catherine S. May; David Weininger (J. Comput. Aided Mol. Des., 1988)

ALADDIN: An integrated tool for computer-assisted molecular design and pharmacophore recognition from geometric, steric, and substructure searching of three-dimensional molecular structures. - John H. Van Drie; David Weininger; Yvonne C. Martin (J. Comput. Aided Mol. Des., 1989)

A fast new approach to pharmacophore mapping and its application to dopaminergic and benzodiazepine agonists. - Yvonne C. Martin; Mark G. Bures; Elizabeth A. Danaher; Jerry DeLazzer; Isabella Lico; Patricia A. Pavlik (J. Comput. Aided Mol. Des., 1993)

New molecular modeling tools using three-dimensional chemical substructures. - Mark G. Bures; Elizabeth A. Danaher; Jerry DeLazzer; Yvonne C. Martin (J. Chem. Inf. Comput. Sci., 1994)

Use of Structure-Activity Data To Compare Structure-Based Clustering Methods and Descriptors for Use in Compound Selection. - Robert D. Brown; Yvonne C. Martin (J. Chem. Inf. Comput. Sci., 1996)

The Information Content of 2D and 3D Structural Descriptors Relevant to Ligand-Receptor Binding. - Robert D. Brown; Yvonne C. Martin (J. Chem. Inf. Comput. Sci., 1997)

Molecular diversity: strategies and concerns (abstract only). - Yvonne C. Martin; Mark G. Bures (RECOMB, 2000)

The role of computational chemistry in translating genomic information into bioactive small molecules (abstract only). - Yvonne C. Martin (RECOMB, 2001)

Ligand binding to domain-3 of human serum albumin: a chemometric analysis. - Philip J. Hajduk; Renaldo Mendoza; Andrew M. Petros; Jeffrey R. Huth; Mark G. Bures; Stephen W. Fesik; Yvonne C. Martin (J. Comput. Aided Mol. Des., 2003)

Application of Belief Theory to Similarity Data Fusion for Use in Analog Searching and Lead Hopping. - Steven W. Muchmore; Derek A. Debe; James T. Metz; Scott P. Brown; Yvonne C. Martin; Philip J. Hajduk (J. Chem. Inf. Model., 2008)

Let's not forget tautomers. - Yvonne C. Martin (J. Comput. Aided Mol. Des., 2009)

Overview of the perspectives devoted to tautomerism in molecular design. - Yvonne C. Martin (J. Comput. Aided Mol. Des., 2010)

Tautomerism, Hammett sigma, and QSAR. - Yvonne C. Martin (J. Comput. Aided Mol. Des., 2010)

Call for papers: Symposium on Tautomers and Biology, American Chemical Society National Meeting, Boston, MA, USA August 2010. - Yvonne C. Martin; Terry R. Stouch (J. Comput. Aided Mol. Des., 2010)

Why you should read Dr. Cramer's perspective. - Yvonne C. Martin (J. Comput. Aided Mol. Des., 2011)

Remembrances of Corwin Hansch. - Yvonne C. Martin (J. Comput. Aided Mol. Des., 2011)

In tribute to Corwin Hansch, father of QSAR. - Yvonne C. Martin; Terry R. Stouch (J. Comput. Aided Mol. Des., 2011)

A giant's shoulders: a Perspective from Professor Norman L. Allinger. - Terry R. Stouch; Yvonne C. Martin (J. Comput. Aided Mol. Des., 2011)

Frozen out: molecular modeling in the age of cryocrystallography. - Yvonne C. Martin; Steven W. Muchmore (J. Comput. Aided Mol. Des., 2012)

Leaving us with fond memories, smiles, SMILES and, alas, tears: a tribute to David Weininger, 1952-2016. - Johann Gasteiger; Yvonne C. Martin; Anthony Nicholls; Tudor I. Oprea; Terry R. Stouch (J. Comput. Aided Mol. Des., 2018)

How medicinal chemists learned about log P. - Yvonne C. Martin (J. Comput. Aided Mol. Des., 2018)

How computational chemistry develops: a tribute to Peter Goodford. - Gabriele Cruciani; Yvonne C. Martin; Andy Vinter; Richard Lewis; Federico Gago; Terry R. Stouch (J. Comput. Aided Mol. Des., 2019)