CAMOIP: a web server for comprehensive analysis on multi-omics of immunotherapy in pan-cancer. - Anqi Lin; Chang Qi; Ting Wei; Mengyao Li; Quan Cheng; Zaoqu Liu; Peng Luo 005; Jian Zhang (Briefings Bioinform., 2022)

Machine learning-based tumor-infiltrating immune cell-associated lncRNAs for predicting prognosis and immunotherapy response in patients with glioblastoma. - Hao Zhang; Nan Zhang; Wantao Wu; Ran Zhou; Shuyu Li; Zeyu Wang; Ziyu Dai; Liyang Zhang; Zaoqu Liu; Jian Zhang; Peng Luo 005; Zhixiong Liu; et al. (Briefings Bioinform., 2022)

STAGER checklist: Standardized Testing and Assessment Guidelines for Evaluating Generative AI Reliability. - Jinghong Chen; Lingxuan Zhu; Weiming Mou; Zaoqu Liu; Quan Cheng; Anqi Lin; Jian Zhang; Peng Luo 005 (CoRR, 2023)

BEST: a web application for comprehensive biomarker exploration on large-scale data in solid tumors. - Zaoqu Liu; Long Liu; Siyuan Weng; Hui Xu; Zhe Xing; Yuqing Ren; Xiaoyong Ge; Libo Wang; Chunguang Guo; Lifeng Li; Quan Cheng; Peng Luo 005; et al. (J. Big Data, 2023)

CPADS: a web tool for comprehensive pancancer analysis of drug sensitivity. - Kexin Li; Hong Yang; Anqi Lin; Jiayi Xie; Haitao Wang; Jianguo Zhou; Shamus R. Carr; Zaoqu Liu; Xiaohua Li; Jian Zhang; Quan Cheng; David S. Schrump; et al. (Briefings Bioinform., 2024)

Automating Exploratory Proteomics Research via Language Models. - Ning Ding 002; Shang Qu; Linhai Xie; Yifei Li; Zaoqu Liu; Kaiyan Zhang; Yibai Xiong; Yuxin Zuo; Zhangren Chen; Ermo Hua; Xingtai Lv; Youbang Sun; et al. (CoRR, 2024)

PESSA: A web tool for pathway enrichment score-based survival analysis in cancer. - Hong Yang; Ying Shi; Anqi Lin; Chang Qi; Zaoqu Liu; Quan Cheng; Kai Miao; Jian Zhang; Peng Luo 005 (PLoS Comput. Biol., 2024)

Computational frameworks transform antagonism to synergy in optimizing combination therapies. - Jinghong Chen; Anqi Lin; Aimin Jiang; Chang Qi; Zaoqu Liu; Quan Cheng; Shuofeng Yuan; Peng Luo 005 (npj Digit. Medicine, 2025)

Automating Exploratory Multiomics Research via Language Models. - Shang Qu; Ning Ding 002; Linhai Xie; Yifei Li; Zaoqu Liu; Kaiyan Zhang; Yibai Xiong; Yuxin Zuo; Zhangren Chen; Ermo Hua; Xingtai Lv; Youbang Sun; et al. (CoRR, 2025)