Hyb4mC: a hybrid DNA2vec-based model for DNA N4-methylcytosine sites prediction. - Ying Liang; Yanan Wu; Ze-Qun Zhang; Nian-Nian Liu; Jun Peng; Jianjun Tang (BMC Bioinform., 2022)

MAGCNSE: predicting lncRNA-disease associations using multi-view attention graph convolutional network and stacking ensemble model. - Ying Liang; Ze-Qun Zhang; Nian-Nian Liu; Ya-Nan Wu; Chang-Long Gu; Ying-Long Wang (BMC Bioinform., 2022)

CRBSP:Prediction of CircRNA-RBP Binding Sites Based on Multimodal Intermediate Fusion. - Nian-Nian Liu; Ze-Qun Zhang; Yanan Wu; Ying-Long Wang; Ying Liang (IEEE ACM Trans. Comput. Biol. Bioinform., 2023)

CapsNet-LDA: predicting lncRNA-disease associations using attention mechanism and capsule network based on multi-view data. - Ze-Qun Zhang; Junlin Xu; Yanan Wu; Nian-Nian Liu; Ying-Long Wang; Ying Liang (Briefings Bioinform., 2023)

MGFmiRNAloc: Predicting miRNA Subcellular Localization Using Molecular Graph Feature and Convolutional Block Attention Module. - Ying Liang; Xiya You; Ze-Qun Zhang; Shi Qiu; Suhui Li; Lianlian Fu (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)