Modular Architecture of Metabolic Pathways Revealed by Conserved Sequences of Reactions. - Ai Muto; Masaaki Kotera; Toshiaki Tokimatsu; Zenichi Nakagawa; Susumu Goto; Minoru Kanehisa (J. Chem. Inf. Model., 2013)

PIERO ontology for analysis of biochemical transformations: Effective implementation of reaction information in the IUBMB enzyme list. - Masaaki Kotera; Yosuke Nishimura; Zenichi Nakagawa; Ai Muto; Yuki Moriya; Shinobu Okamoto; Shuichi Kawashima; Toshiaki Katayama; Toshiaki Tokimatsu; Minoru Kanehisa; Susumu Goto (J. Bioinform. Comput. Biol., 2014)

Identification of Enzyme Genes Using Chemical Structure Alignments of Substrate-Product Pairs. - Yuki Moriya; Takuji Yamada; Shujiro Okuda; Zenichi Nakagawa; Masaaki Kotera; Toshiaki Tokimatsu; Minoru Kanehisa; Susumu Goto (J. Chem. Inf. Model., 2016)

Enteropathway: the metabolic pathway database for the human gut microbiota. - Hirotsugu Shiroma; Youssef Darzi; Etsuko Terajima; Zenichi Nakagawa; Hirotaka Tsuchikura; Naoki Tsukuda; Yuki Moriya; Shujiro Okuda; Susumu Goto; Takuji Yamada (Briefings Bioinform., 2024)