DiNeR: a Differential graphical model for analysis of co-regulation Network Rewiring. - Jing Zhang 062; Jason Liu 003; Donghoon Lee 006; Shaoke Lou; Zhanlin Chen; Gamze Gürsoy; Mark Gerstein (BMC Bioinform., 2020)

DECODE: a Deep-learning framework for Condensing enhancers and refining boundaries with large-scale functional assays. - Zhanlin Chen; Jing Zhang 062; Jason Liu 003; Yi Dai; Donghoon Lee 006; Martin Renqiang Min; Min Xu 009; Mark Gerstein (Bioinform., 2021)

Forest Fire Clustering: Cluster-oriented Label Propagation Clustering and Monte Carlo Verification Inspired by Forest Fire Dynamics. - Zhanlin Chen; Philip Tuckman; Jeremy Goldwasser; Jing Zhang 062; Mark Gerstein (CoRR, 2021)

LunarNav: Crater-based Localization for Long-range Autonomous Lunar Rover Navigation. - Shreyansh Daftry; Zhanlin Chen; Yang Cheng; Scott Tepsuporn; Brian Coltin; Ussama Naam; Lanssie Mingyue Ma; Shehryar Khattak; Matthew Deans; Larry H. Matthies (CoRR, 2023)