REBET: a method to determine the number of cell clusters based on batch effect removal. - Zhao-Yu Fang; Cui-Xiang Lin; Yun-Pei Xu; Hong-Dong Li; Qing-Song Xu (Briefings Bioinform., 2021)

Graph deep learning enabled spatial domains identification for spatial transcriptomics. - Teng Liu; Zhao-Yu Fang; Xin Li; Li-Ning Zhang; Dong-Sheng Cao 001; Mingzhu Yin (Briefings Bioinform., 2023)