Deep forest ensemble learning for classification of alignments of non-coding RNA sequences based on multi-view structure representations. - Ying Li 004; Qi Zhang 061; Zhaoqian Liu; Cankun Wang; Siyu Han; Qin Ma 003; Wei Du 002 (Briefings Bioinform., 2021)

The functional determinants in the organization of bacterial genomes. - Zhaoqian Liu; Jingtong Feng; Bin Yu 007; Qin Ma 003; Bingqiang Liu (Briefings Bioinform., 2021)

Network analyses in microbiome based on high-throughput multi-omics data. - Zhaoqian Liu; Anjun Ma; Ewy A. Mathé; Marlena Merling; Qin Ma 003; Bingqiang Liu (Briefings Bioinform., 2021)

A novel computational framework for genome-scale alternative transcription units prediction. - Qi Wang; Zhaoqian Liu; Bo Yan; Wen-Chi Chou; Laurence Ettwiller; Qin Ma 003; Bingqiang Liu (Briefings Bioinform., 2021)

Inference of disease-associated microbial gene modules based on metagenomic and metatranscriptomic data. - Zhaoqian Liu; Qi Wang; Anjun Ma; Shaohong Feng; Dongjun Chung; Jing Zhao; Qin Ma 003; Bingqiang Liu (Comput. Biol. Medicine, 2023)

SEAF: Secure Evaluation on Activation Functions with Dynamic Precision for Secure Two-Party Inference. - Hao Guo; Zhaoqian Liu; Ximing Fu; Zhusen Liu (IACR Cryptol. ePrint Arch., 2025)

Diffusion-based Task-oriented Semantic Communications with Model Inversion Attack. - Xuesong Wang; Mo Li; Xingyan Shi; Zhaoqian Liu; Shenghao Yang 001 (CoRR, 2025)