GAADE: identification spatially variable genes based on adaptive graph attention network. - Tianjiao Zhang; Hao Sun; Zhenao Wu; Zhongqian Zhao; Xingjie Zhao; Hongfei Zhang; Bo Gao; Guohua Wang (Briefings Bioinform., 2024)

CPPLS-MLP: a method for constructing cell-cell communication networks and identifying related highly variable genes based on single-cell sequencing and spatial transcriptomics data. - Tianjiao Zhang; Zhenao Wu; Liangyu Li; Jixiang Ren; Ziheng Zhang; Guohua Wang (Briefings Bioinform., 2024)

VGAE-CCI: variational graph autoencoder-based construction of 3D spatial cell-cell communication network. - Tianjiao Zhang; Xiang Zhang; Zhenao Wu; Jixiang Ren; Zhongqian Zhao; Hongfei Zhang; Guohua Wang; Tao Wang 082 (Briefings Bioinform., 2024)