NNcon: improved protein contact map prediction using 2D-recursive neural networks. - Allison N. Tegge; Zheng Wang 019; Jesse Eickholt; Jianlin Cheng (Nucleic Acids Res., 2009)

MULTICOM: a multi-level combination approach to protein structure prediction and its assessments in CASP8. - Zheng Wang 019; Jesse Eickholt; Jianlin Cheng (Bioinform., 2010)

APOLLO: a quality assessment service for single and multiple protein models. - Zheng Wang 019; Jesse Eickholt; Jianlin Cheng (Bioinform., 2011)

The MULTICOM toolbox for protein structure prediction. - Jianlin Cheng; Jilong Li; Zheng Wang 019; Jesse Eickholt; Xin Deng (BMC Bioinform., 2012)

Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics. - Trupti Joshi; Kapil Patil; Michael R. Fitzpatrick; D. Franklin Levi; Qiuming Yao; Jeffrey R. Cook; Zheng Wang 019; Marc Libault; Laurent Brechenmacher; Babu Valliyodan; Xiaolei Wu; Jianlin Cheng; et al. (BMC Genom., 2012)

Recursive protein Modeling: a Divide and Conquer Strategy for protein Structure Prediction and its Case Study in CASP9. - Jianlin Cheng; Jesse Eickholt; Zheng Wang 019; Xin Deng (J. Bioinform. Comput. Biol., 2012)