PISV: A novel algorithm for peptide identification using spectrum vector. - Zhenhua Yu 002; Minghui Wang; Ao Li 001 (BMEI, 2012)

CLImAT: accurate detection of copy number alteration and loss of heterozygosity in impure and aneuploid tumor samples using whole-genome sequencing data. - Zhenhua Yu 002; Yuanning Liu; Yi Shen; Minghui Wang; Ao Li 001 (Bioinform., 2014)

DeAnnCNV: a tool for online detection and annotation of copy number variations from whole-exome sequencing data. - Yuanwei Zhang; Zhenhua Yu 002; Rongjun Ban; Huan Zhang; Furhan Iqbal; Aiwu Zhao; Ao Li 001; Qinghua Shi (Nucleic Acids Res., 2015)

CloneCNA: detecting subclonal somatic copy number alterations in heterogeneous tumor samples from whole-exome sequencing data. - Zhenhua Yu 002; Ao Li 001; Minghui Wang (BMC Bioinform., 2016)

Integrated Modeling of GC-Content, Mappability, Tumor Impurity and Aneuploidy for Accurate Detection of Genomic Aberrations. - Zhenhua Yu 002; Ao Li 001; Liang Zou; Xuehong Sun; Minghui Wang; Peng Zhang (IEEE Access, 2018)

Learning Relational-Structural Networks for Robust Face Alignment. - Congcong Zhu; Xing Wang; Suping Wu; Zhenhua Yu 002 (ICANN (3), 2019)

Learning Deformable Hourglass Networks (DHGN) for Unconstrained Face Alignment. - Jiaqiang Zhang; Congcong Zhu; Suping Wu; Zhenhua Yu 002; Xuehong Sun; Hao Liu 019 (ICIP, 2019)

Multi-Agent Deep Collaboration Learning for Face Alignment Under Different Perspectives. - Congcong Zhu; Suping Wu; Zhenhua Yu 002; Xing Wang; Hao Liu 019 (ICIP, 2019)

Similarity-Aware Deep Adversarial Learning for Facial Age Estimation. - Penghui Sun; Hao Liu 019; Xin Wang; Zhenhua Yu 002; Suping Wu (ICME, 2019)

Dual-Cycle Deep Reinforcement Learning for Stabilizing Face Tracking. - Congcong Zhu; Zhenhua Yu 002; Suping Wu; Hao Liu 019 (ICME Workshops, 2019)

Towards Omni-Supervised Face Alignment for Large Scale Unlabeled Videos. - Congcong Zhu; Hao Liu 019; Zhenhua Yu 002; Xuehong Sun (AAAI, 2020)

Learning Neighborhood-Reasoning Label Distribution (NRLD) for Facial Age Estimation. - Zongyong Deng; Mo Zhao; Hao Liu 019; Zhenhua Yu 002; Feng Feng (ICME, 2020)

Network Architecture Reasoning Via Deep Deterministic Policy Gradient. - Huidong Liu; Fang Du; Xiaofen Tang; Hao Liu 019; Zhenhua Yu 002 (ICME, 2020)

GANcon: Protein Contact Map Prediction With Deep Generative Adversarial Network. - Hang Yang; Minghui Wang; Zhenhua Yu 002; Xing-Ming Zhao; Ao Li 001 (IEEE Access, 2020)

SCSsim: an integrated tool for simulating single-cell genome sequencing data. - Zhenhua Yu 002; Fang Du; Xuehong Sun; Ao Li 001 (Bioinform., 2020)

SimuSCoP: reliably simulate Illumina sequencing data based on position and context dependent profiles. - Zhenhua Yu 002; Fang Du; Rongjun Ban; Yuanwei Zhang (BMC Bioinform., 2020)

Similarity-Aware and Variational Deep Adversarial Learning for Robust Facial Age Estimation. - Hao Liu 019; Penghui Sun; Jiaqiang Zhang; Suping Wu; Zhenhua Yu 002; Xuehong Sun (IEEE Trans. Multim., 2020)

Enhanced Bayesian detection for copy number alterations from next-generation sequencing data. - Zhenhua Yu 002; Fang Du (BIBM, 2021)

A parametric model for clustering single-cell mutation data. - Jiaqian Yan; Jianing Xi; Zhenhua Yu 002 (BIBM, 2022)

AMC: accurate mutation clustering from single-cell DNA sequencing data. - Zhenhua Yu 002; Fang Du (Bioinform., 2022)

CAP: instance complexity-aware network pruning. - Jiapeng Wang; Ming Ma; Zhenhua Yu 002 (CoRR, 2022)

DARTS-PAP: Differentiable Neural Architecture Search by Polarization of Instance Complexity Weighted Architecture Parameters. - Yunhong Li; Shuai Li 013; Zhenhua Yu 002 (MMM (2), 2023)

bmVAE: a variational autoencoder method for clustering single-cell mutation data. - Jiaqian Yan; Ming Ma; Zhenhua Yu 002 (Bioinform., 2023)

rcCAE: a convolutional autoencoder method for detecting intra-tumor heterogeneity and single-cell copy number alterations. - Zhenhua Yu 002; Furui Liu; Fangyuan Shi; Fang Du (Briefings Bioinform., 2023)

CoT: a transformer-based method for inferring tumor clonal copy number substructure from scDNA-seq data. - Furui Liu; Fangyuan Shi; Fang Du; Xiangmei Cao; Zhenhua Yu 002 (Briefings Bioinform., 2024)

scTCA: a hybrid Transformer-CNN architecture for imputation and denoising of scDNA-seq data. - Zhenhua Yu 002; Furui Liu; Yang Li (Briefings Bioinform., 2024)