Multilign: an algorithm to predict secondary structures conserved in multiple RNA sequences. - Zhenjiang Xu; David H. Mathews (Bioinform., 2011)

PM2RA: A Framework for Detecting and Quantifying Relationship Alterations in Microbial Community. - Zhi Liu; Kai Mi 002; Zhenjiang Xu; Qiankun Zhang; Xingyin Liu (Genom. Proteom. Bioinform., 2021)