Exploring Implicit Semantic Constraints for Bilingual Word Embeddings. - Jinsong Su; Zhenqiao Song; Yaojie Lu 001; Mu Xu; Changxing Wu; Yidong Chen 001 (Neural Process. Lett., 2018)

Generating Responses with a Specific Emotion in Dialog. - Zhenqiao Song; Xiaoqing Zheng; Lu Liu; Mu Xu; Xuanjing Huang 001 (ACL (1), 2019)

Improving Coreference Resolution by Leveraging Entity-Centric Features with Graph Neural Networks and Second-order Inference. - Lu Liu; Zhenqiao Song; Xiaoqing Zheng (CoRR, 2020)

Generating Personalized Titles Incorporating Advertisement Profile. - Jingbing Wang; Zhuolin Hao; Minping Zhou; Jiaze Chen; Hao Zhou; Zhenqiao Song; Jinghao Wang; Jiandong Yang; Shiguang Ni (DASFAA (3), 2021)

Triangular Bidword Generation for Sponsored Search Auction. - Zhenqiao Song; Jiaze Chen; Hao Zhou 012; Lei Li 005 (WSDM, 2021)

MTG: A Benchmarking Suite for Multilingual Text Generation. - Yiran Chen 013; Zhenqiao Song; Xianze Wu; Danqing Wang; Jingjing Xu 001; Jiaze Chen; Hao Zhou 012; Lei Li 005 (CoRR, 2021)

Jointly learning bilingual word embeddings and alignments. - Zhenqiao Song; Xiaoqing Zheng; Xuanjing Huang 001 (Mach. Transl., 2021)

switch-GLAT: Multilingual Parallel Machine Translation Via Code-Switch Decoder. - Zhenqiao Song; Hao Zhou 012; Lihua Qian; Jingjing Xu 001; Shanbo Cheng; Mingxuan Wang; Lei Li 005 (ICLR, 2022)

MTG: A Benchmark Suite for Multilingual Text Generation. - Yiran Chen 013; Zhenqiao Song; Xianze Wu; Danqing Wang; Jingjing Xu 001; Jiaze Chen; Hao Zhou 012; Lei Li 005 (NAACL-HLT (Findings), 2022)

INSTRUCTSCORE: Towards Explainable Text Generation Evaluation with Automatic Feedback. - Wenda Xu; Danqing Wang; Liangming Pan; Zhenqiao Song; Markus Freitag; William Wang 001; Lei Li 005 (EMNLP, 2023)

Importance Weighted Expectation-Maximization for Protein Sequence Design. - Zhenqiao Song; Lei Li 005 (ICML, 2023)

Joint Design of Protein Sequence and Structure based on Motifs. - Zhenqiao Song; Yunlong Zhao 002; Yufei Song; Wenxian Shi; Yang Yang 059; Lei Li 005 (CoRR, 2023)

Functional Geometry Guided Protein Sequence and Backbone Structure Co-Design. - Zhenqiao Song; Yunlong Zhao 002; Wenxian Shi; Yang Yang 059; Lei Li 005 (CoRR, 2023)

Hire a Linguist!: Learning Endangered Languages in LLMs with In-Context Linguistic Descriptions. - Kexun Zhang; Yee Man Choi; Zhenqiao Song; Taiqi He; William Yang Wang; Lei Li 005 (ACL (Findings), 2024)

SurfPro: Functional Protein Design Based on Continuous Surface. - Zhenqiao Song; Tinglin Huang; Lei Li 005; Wengong Jin (ICML, 2024)

Generative Enzyme Design Guided by Functionally Important Sites and Small-Molecule Substrates. - Zhenqiao Song; Yunlong Zhao 002; Wenxian Shi; Wengong Jin; Yang Yang 059; Lei Li 005 (ICML, 2024)

Protein-Nucleic Acid Complex Modeling with Frame Averaging Transformer. - Tinglin Huang; Zhenqiao Song; Rex Ying; Wengong Jin (NeurIPS, 2024)

Hire a Linguist!: Learning Endangered Languages with In-Context Linguistic Descriptions. - Kexun Zhang; Yee Man Choi; Zhenqiao Song; Taiqi He; William Yang Wang; Lei Li 005 (CoRR, 2024)

JanusDNA: A Powerful Bi-directional Hybrid DNA Foundation Model. - Qihao Duan; Bingding Huang; Zhenqiao Song; Irina Lehmann; Lei Gu; Roland Eils; Benjamin Wild (CoRR, 2025)

Natural Language Guided Ligand-Binding Protein Design. - Zhenqiao Song; Ramith Hettiarachchi; Chuan Li; Jianwen Xie; Lei Li (CoRR, 2025)

PPDiff: Diffusing in Hybrid Sequence-Structure Space for Protein-Protein Complex Design. - Zhenqiao Song; Tiaoxiao Li; Lei Li; Martin Renqiang Min (CoRR, 2025)