gwSPIA: Improved Signaling Pathway Impact Analysis With Gene Weights. - Zhenshen Bao; Yihua Zhu; Qinyu Ge; Wanjun Gu; Xianjun Dong; Yunfei Bai (IEEE Access, 2019)

Understanding the mechanisms of cancers based on function sub-pathways. - Wenbin Liu; Peng Xu 004; Zhenshen Bao (Comput. Biol. Chem., 2019)

Signaling Pathway Analysis Combined With the Strength Variations of Interactions Between Genes Under Different Conditions. - Zhenshen Bao; Yihua Zhu; Qinyu Ge; Wanjun Gu; Xianjun Dong; Yunfei Bai (IEEE Access, 2020)

Identifying cancer specific signaling pathways based on the dysregulation between genes. - Xiaohan Li; Bing Zhang; Kequan Yu; Zhenshen Bao; Weizhong Zhang; Yunfei Bai (Comput. Biol. Chem., 2021)

Detect the early-warning signals of diseases based on signaling pathway perturbations on a single sample. - Yanhao Huo; Geng Zhao 003; Luoshan Ruan; Peng Xu 004; Gang Fang; Fengyue Zhang; Zhenshen Bao; Xin Li (BMC Bioinform., 2022)

PmiRtarbase: A positive miRNA-target regulations database. - Peng Xu 004; Xianbin Li; Yijun Liang; Zhenshen Bao; Fengyue Zhang; Lili Gu; Saeed Kosari; Wenbin Liu (Comput. Biol. Chem., 2022)

A simple pre-disease state prediction method based on variations of gene vector features. - Zhenshen Bao; Yihua Zheng; Xianbin Li; Yanhao Huo; Geng Zhao 003; Fengyue Zhang; Xiaoyan Li; Peng Xu 004; Wenbin Liu; Henry Han (Comput. Biol. Medicine, 2022)