TRED: a Transcriptional Regulatory Element Database and a platform for in silico gene regulation studies. - Fang Zhao 004; Zhenyu Xuan; Lihua Liu; Michael Q. Zhang (Nucleic Acids Res., 2005)

TRED: a transcriptional regulatory element database, new entries and other development. - C. Jiang; Zhenyu Xuan; Fang Zhao 004; Michael Q. Zhang (Nucleic Acids Res., 2007)

Using quality scores and longer reads improves accuracy of Solexa read mapping. - Andrew D. Smith; Zhenyu Xuan; Michael Q. Zhang (BMC Bioinform., 2008)

Updates to the RMAP short-read mapping software. - Andrew D. Smith; Wen-Yu Chung; Emily Hodges; Jude Kendall; Gregory J. Hannon; James Hicks; Zhenyu Xuan; Michael Q. Zhang (Bioinform., 2009)

Understanding protein evolutionary rate by integrating gene co-expression with protein interactions. - Kaifang Pang; Chao Cheng; Zhenyu Xuan; Huanye Sheng; Xiaotu Ma (BMC Syst. Biol., 2010)

Estimating developmental states of tumors and normal tissues using a linear time-ordered model. - Bo Zhang 009; Beibei Chen; Tao Wu 002; Zhenyu Xuan; Xiaopeng Zhu; Runsheng Chen (BMC Bioinform., 2011)

MTGIpick allows robust identification of genomic islands from a single genome. - Qi Dai; Chaohui Bao; Yabing Hai Hai; Sheng Ma; Tao Zhou; Cong Wang; Yunfei Wang; Wenwen Huo; Xiaoqing Liu; Yuhua Yao; Zhenyu Xuan; Min Chen 014; et al. (Briefings Bioinform., 2018)

FGN: Fusion Glyph Network for Chinese Named Entity Recognition. - Zhenyu Xuan; Rui Bao; Shengyi Jiang (CCKS, 2020)

FGN: Fusion Glyph Network for Chinese Named Entity Recognition. - Zhenyu Xuan; Rui Bao; Chuyu Ma; Shengyi Jiang (CoRR, 2020)

Implicit emotional tendency recognition based on disconnected recurrent neural networks. - Yiting Yan; Zhenghong Xiao; Zhenyu Xuan; Yangjia Ou (Int. J. Comput. Sci. Eng., 2021)