A Tool for Collaborative Construction of Large Biological Ontologies. - Jie Bao 001; Zhiliang Hu; Doina Caragea; James M. Reecy; Vasant G. Honavar (DEXA Workshops, 2006)

MiRFinder: an improved approach and software implementation for genome-wide fast microRNA precursor scans. - Ting-Hua Huang; Bin Fan; Max F. Rothschild; Zhi-Liang Hu; Kui Li; Shu-Hong Zhao (BMC Bioinform., 2007)

AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond. - Zhi-Liang Hu; Eric Ryan Fritz; James M. Reecy (Nucleic Acids Res., 2007)

SNPlotz: a generic genome plot tool to aid the SNP association studies. - Zhi-Liang Hu; Rex Fernando; Dorian Garrick; James M. Reecy (BMC Bioinform., 2010)

Extension of Animal QTLdb: QTL meta-analysis on the fly. - Zhi-Liang Hu; Xiaolin Wu 004; James M. Reecy (BCB, 2011)

The catfish genome database cBARBEL: an informatic platform for genome biology of ictalurid catfish. - Jianguo Lu; Eric Peatman; Qing Yang; Shaolin Wang; Zhiliang Hu; James M. Reecy; Huseyin Kucuktas; Zhanjiang Liu (Nucleic Acids Res., 2011)

The Vertebrate Trait Ontology: a controlled vocabulary for the annotation of trait data across species. - Carissa A. Park; Susan M. Bello; Cynthia L. Smith; Zhi-Liang Hu; Diane H. Munzenmaier; Rajni Nigam; Jennifer R. Smith; Mary Shimoyama; Janan T. Eppig; James M. Reecy (J. Biomed. Semant., 2013)

Animal QTLdb: an improved database tool for livestock animal QTL/association data dissemination in the post-genome era. - Zhi-Liang Hu; Carissa A. Park; Xiaolin Wu 004; James M. Reecy (Nucleic Acids Res., 2013)

Multi-objective constrained model predictive controller design of grid-inverter. - Bin Liu; Zhiliang Hu (ASCC, 2015)

The BioMart community portal: an innovative alternative to large, centralized data repositories. - Damian Smedley; Syed Haider; Steffen Durinck; Luca Pandini; Paolo Provero; James E. Allen; Olivier Arnaiz; Mohammad Hamza Awedh; Richard A. Baldock; Giulia Barbiera; Philippe Bardou; Tim Beck; et al. (Nucleic Acids Res., 2015)

Developmental progress and current status of the Animal QTLdb. - Zhi-Liang Hu; Carissa A. Park; James M. Reecy (Nucleic Acids Res., 2016)

AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. - Lisa C. Harper; Jacqueline D. Campbell; Ethalinda K. S. Cannon; Sook Jung; Monica Poelchau; Ramona L. Walls; Carson M. Andorf; Elizabeth Arnaud; Tanya Z. Berardini; Clayton L. Birkett; Steven B. Cannon; James D. Carson; et al. (Database J. Biol. Databases Curation, 2018)

Building a livestock genetic and genomic information knowledgebase through integrative developments of Animal QTLdb and CorrDB. - Zhi-Liang Hu; Carissa A. Park; James M. Reecy (Nucleic Acids Res., 2019)

Classifying Animal Breeds with the Vertebrate Breed Ontology (VBO). - Sabrina Toro; Nicolas Matentzoglu; Kathleen R. Mullen; Nicole A. Vasilevsky; Halie Rando; Melissa A. Haendel; Christopher J. Mungall; Zhi-Liang Hu; Gregoire Leroy; Imke Tammen; Frank W. Nicholas (ICBO, 2022)

Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services. - Zhi-Liang Hu; Carissa A. Park; James M. Reecy (Nucleic Acids Res., 2022)

A combinatorial approach implementing new database structures to facilitate practical data curation management of QTL, association, correlation and heritability data on trait variants. - Zhi-Liang Hu; Carissa A. Park; James M. Reecy (Database J. Biol. Databases Curation, 2023)

DHLA: Dynamic Hybrid Label Assignment for End-to-End Object Detection. - Zhiliang Hu; Si Chen 002; Yang Hua 001; Da-Han Wang; Shunzhi Zhu; Yan Yan 001 (IEEE Trans. Circuits Syst. Video Technol., 2025)