Tinker-OpenMM: Absolute and relative alchemical free energies using AMOEBA on GPUs. - Matthew Harger; Daniel Li; Zhi Wang 021; Kevin N. Dalby; Louis Lagardère; Jean-Philip Piquemal; Jay W. Ponder; Pengyu Y. Ren (J. Comput. Chem., 2017)

Absolute binding free energies for the SAMPL6 cucurbit[8]uril host-guest challenge via the AMOEBA polarizable force field. - Marie L. Laury; Zhi Wang 021; Aaron S. Gordon; Jay W. Ponder (J. Comput. Aided Mol. Des., 2018)

Tinker-HP : Accelerating Molecular Dynamics Simulations of Large Complex Systems with Advanced Point Dipole Polarizable Force Fields using GPUs and Multi-GPUs systems. - Olivier Adjoua; Louis Lagardère; Luc-Henri Jolly; Arnaud Durocher; Thibaut Very; Isabelle Dupays; Zhi Wang 021; Théo Jaffrelot Inizan; Frédéric Célerse; Pengyu Y. Ren; Jay W. Ponder; Jean-Philip Piquemal (CoRR, 2020)

FortranArray. - Zhi Wang 021 (Zenodo, 2020)

AMOEBA binding free energies for the SAMPL7 TrimerTrip host-guest challenge. - Yuanjun Shi; Marie L. Laury; Zhi Wang 021; Jay W. Ponder (J. Comput. Aided Mol. Des., 2021)

A predictive machine learning force-field framework for liquid electrolyte development. - Sheng Gong; Yumin Zhang; Zhenliang Mu; Zhichen Pu; Hongyi Wang; Xu Han; Zhiao Yu; Mengyi Chen; Tianze Zheng; Zhi Wang 021; Lifei Chen; Zhenze Yang; et al. (Nat. Mac. Intell., 2025)