TASSEL: software for association mapping of complex traits in diverse samples. - Peter J. Bradbury; Zhiwu Zhang 001; Dallas E. Kroon; Terry M. Casstevens; Yogesh Ramdoss; Edward S. Buckler (Bioinform., 2007)

Software engineering the mixed model for genome-wide association studies on large samples. - Zhiwu Zhang 001; Edward S. Buckler; Terry M. Casstevens; Peter J. Bradbury (Briefings Bioinform., 2009)

GAPIT: genome association and prediction integrated tool. - Alexander E. Lipka; Feng Tian; Qishan Wang 001; Jason Peiffer; Meng Li; Peter J. Bradbury; Michael A. Gore; Edward S. Buckler; Zhiwu Zhang 001 (Bioinform., 2012)

Systematic bias of correlation coefficient may explain negative accuracy of genomic prediction. - Yao Zhou; M. Isabel Vales; Aoxue Wang; Zhiwu Zhang 001 (Briefings Bioinform., 2017)

iPat: intelligent prediction and association tool for genomic research. - Chunpeng James Chen; Zhiwu Zhang 001 (Bioinform., 2018)

GRID: A Python Package for Field Plot Phenotyping Using Aerial Images. - Chunpeng James Chen; Zhiwu Zhang 001 (Remote. Sens., 2020)

MMAP: a cloud computing platform for mining the maximum accuracy of predicting phenotypes from genotypes. - Wei Huang; Ping Zheng; Zhenhai Cui; Zhuo Li; Yifeng Gao; Helong Yu; You Tang; Xiaohui Yuan; Zhiwu Zhang 001 (Bioinform., 2021)

GAPIT Version 3: Boosting Power and Accuracy for Genomic Association and Prediction. - Jiabo Wang; Zhiwu Zhang 001 (Genom. Proteom. Bioinform., 2021)

rMVP: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool for Genome-wide Association Study. - Lilin Yin; Haohao Zhang; Zhenshuang Tang; Jingya Xu; Dong Yin; Zhiwu Zhang 001; Xiaohui Yuan; Mengjin Zhu; Shuhong Zhao; Xinyun Li; Xiaolei Liu (Genom. Proteom. Bioinform., 2021)

Genome Assembly of Alfalfa Cultivar Zhongmu-4 and Identification of SNPs Associated with Agronomic Traits. - Ruicai Long; Fan Zhang 055; Zhiwu Zhang 001; Mingna Li; Lin Chen; Xue Wang; Wenwen Liu; Tiejun Zhang; Long-Xi Yu; Fei He; Xueqian Jiang; Xijiang Yang; et al. (Genom. Proteom. Bioinform., 2022)

Ladder: A software to label images, detect objects and deploy models recurrently for object detection. - Zhou Tang; Zhiwu Zhang 001 (CoRR, 2023)

ROOSTER: An image labeler and classifier through interactive recurrent annotation. - Zhou Tang; Yang Hu; Zhiwu Zhang 001 (F1000Research, 2023)

Affordable High Throughput Field Detection of Wheat Stripe Rust Using Deep Learning with Semi-Automated Image Labeling. - Zhou Tang; Meinan Wang; Michael Schirrmann; Karl-Heinz Dammer; Xianran Li; Robert Brueggeman; Sindhuja Sankaran; Arron H. Carter; Michael O. Pumphrey; Yang Hu; Xianming Chen; Zhiwu Zhang 001 (Comput. Electron. Agric., 2023)