Allosite: a method for predicting allosteric sites. - Wenkang Huang; Shaoyong Lu; Zhimin Huang; Xinyi Liu 003; Linkai Mou; Yu Luo; Yanlong Zhao; Yaqin Liu; Zhongjie Chen; Tingjun Hou; Jian Zhang 037 (Bioinform., 2013)

Alloscore: a method for predicting allosteric ligand-protein interactions. - Shuai Li; Qiancheng Shen; Minyi Su; Xinyi Liu 003; Shaoyong Lu; Zhongjie Chen; Renxiao Wang; Jian Zhang 037 (Bioinform., 2016)

ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks. - Qiancheng Shen; Guanqiao Wang; Shuai Li; Xinyi Liu 003; Shaoyong Lu; Zhongjie Chen; Kun Song 003; Junhao Yan; Lv Geng; Zhimin Huang; Wenkang Huang; Guoqiang Chen; et al. (Nucleic Acids Res., 2016)

A low complexity LDPC-BCH concatenated decoder for NAND flash memory. - Zhongjie Chen; Jin Sha; Chuan Zhang 001; Feng Yan (IEICE Electron. Express, 2018)

ESGReveal: An LLM-based approach for extracting structured data from ESG reports. - Yi Zou; Mengying Shi; Zhongjie Chen; Zhu Deng; ZongXiong Lei; Zihan Zeng; Shiming Yang; HongXiang Tong; Lei Xiao; Wenwen Zhou (CoRR, 2023)

Free$ rm ^{3}$Net: Gliding Free, Orientation Free, and Anchor Free Network for Oriented Object Detection. - Zhonghong Ou; Zhongjie Chen; Shengyi Shen; Lina Fan; Siyuan Yao; Meina Song; Pan Hui 001 (IEEE Trans. Multim., 2023)

DockRDMA: Hybrid RDMA Virtualization for Containerized Clouds. - Xiaoyu Li; Ran Shu 001; Zhongjie Chen; Xiaohui Luo; Yiran Zhang; Bo Wang 066; Qingkai Meng; Fengyuan Ren (ICNP, 2024)

Predictable Host Networking in Data Centers: Challenges, Techniques and Future Directions. - Zhongjie Chen; Qingkai Meng; Yiran Zhang; Ziyang Zheng; Fengyuan Ren (IEEE Netw., 2024)

ScalaTap: Scalable Outbound Rate Limiting in Public Cloud. - Zhongjie Chen; Yingchen Fan; Kun Qian 017; Qingkai Meng; Ran Shu 001; Xiaoyu Li; Yiran Zhang; Bo Wang 066; Wei Li 262; Fengyuan Ren (INFOCOM, 2025)

Handling Missing Entities in Zero-Shot Named Entity Recognition: Integrated Recall and Retrieval Augmentation. - Ruichu Cai; Junhao Lu; Zhongjie Chen; Boyan Xu; Zhifeng Hao (NAACL (Long Papers), 2025)

eTran: Extensible Kernel Transport with eBPF. - Zhongjie Chen; Qingkai Meng; ChonLam Lao; Yifan Liu; Fengyuan Ren; Minlan Yu; Yang Zhou (NSDI, 2025)

An Extensible Software Transport Layer for GPU Networking. - Yang Zhou; Zhongjie Chen; Ziming Mao; ChonLam Lao; Shuo Yang; Pravein Govindan Kannan; Jiaqi Gao; Yilong Zhao; Yongji Wu; Kaichao You; Fengyuan Ren; Zhiying Xu; et al. (CoRR, 2025)