End-to-End Cell Recognition by Point Annotation. - Zhongyi Shui; Shichuan Zhang; Chenglu Zhu; Bingchuan Wang; Pingyi Chen; Sunyi Zheng; Lin Yang 002 (MICCAI (4), 2022)

ChrSNet: Chromosome Straightening Using Self-attention Guided Networks. - Sunyi Zheng; Jingxiong Li; Zhongyi Shui; Chenglu Zhu; Yunlong Zhang; Pingyi Chen; Lin Yang 002 (MICCAI (4), 2022)

Unsupervised Dense Nuclei Detection and Segmentation with Prior Self-activation Map For Histology Images. - Pingyi Chen; Chenglu Zhu; Zhongyi Shui; Jiatong Cai; Sunyi Zheng; Shichuan Zhang; Lin Yang 002 (CoRR, 2022)

Evolutionary Algorithm with Dynamic Population Size for Constrained Multiobjective Optimization. - Bing-Chuan Wang; Zhongyi Shui; Yun Feng 001; Zhongwei Ma (Swarm Evol. Comput., 2022)

Multi-modal Learning with Missing Modality in Predicting Axillary Lymph Node Metastasis. - Shichuan Zhang; Sunyi Zheng; Zhongyi Shui; Honglin Li 001; Lin Yang 002 (BIBM, 2023)

Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supervised Pathology Whole Slide Image Classification. - Honglin Li 001; Chenglu Zhu; Yunlong Zhang; Yuxuan Sun 002; Zhongyi Shui; Wenwei Kuang; Sunyi Zheng; Lin Yang 002 (CVPR, 2023)

Exploring Unsupervised Cell Recognition with Prior Self-activation Maps. - Pingyi Chen; Chenglu Zhu; Zhongyi Shui; Jiatong Cai; Sunyi Zheng; Shichuan Zhang; Lin Yang 002 (MICCAI (8), 2023)

Deformable Proposal-Aware P2PNet: A Universal Network for Cell Recognition under Point Supervision. - Zhongyi Shui; Sunyi Zheng; Xiaoxuan Yu; Shichuan Zhang; Honglin Li 001; Jingxiong Li; Lin Yang 002 (CoRR, 2023)

PathAsst: Redefining Pathology through Generative Foundation AI Assistant for Pathology. - Yuxuan Sun 002; Chenglu Zhu; Sunyi Zheng; Kai Zhang 033; Zhongyi Shui; Xiaoxuan Yu; Yizhi Zhao; Honglin Li 001; Yunlong Zhang; Ruojia Zhao; Xinheng Lyu; Lin Yang 002 (CoRR, 2023)

Semi-supervised Cell Recognition under Point Supervision. - Zhongyi Shui; Yizhi Zhao; Sunyi Zheng; Yunlong Zhang; Honglin Li 001; Shichuan Zhang; Xiaoxuan Yu; Chenglu Zhu; Lin Yang 002 (CoRR, 2023)

Test-Time Training for Semantic Segmentation with Output Contrastive Loss. - Yunlong Zhang; Yuxuan Sun 002; Sunyi Zheng; Zhongyi Shui; Chenglu Zhu; Lin Yang 002 (CoRR, 2023)

Unleashing the Power of Prompt-driven Nucleus Instance Segmentation. - Zhongyi Shui; Yunlong Zhang; Kai Yao; Chenglu Zhu; Yuxuan Sun 002; Lin Yang 002 (CoRR, 2023)

Combining Reduced-Order Model With Data-Driven Model for Parameter Estimation of Lithium-Ion Battery. - Zhongyi Shui; Xu-Hao Li; Yun Feng 001; Bing-Chuan Wang; Yong Wang 002 (IEEE Trans. Ind. Electron., 2023)

DPA-P2PNet: Deformable Proposal-Aware P2PNet for Accurate Point-Based Cell Detection. - Zhongyi Shui; Sunyi Zheng; Chenglu Zhu; Shichuan Zhang; Xiaoxuan Yu; Honglin Li 001; Jingxiong Li; Pingyi Chen; Lin Yang 002 (AAAI, 2024)

PathAsst: A Generative Foundation AI Assistant towards Artificial General Intelligence of Pathology. - Yuxuan Sun 002; Chenglu Zhu; Sunyi Zheng; Kai Zhang 033; Lin Sun 006; Zhongyi Shui; Yunlong Zhang; Honglin Li 001; Lin Yang 002 (AAAI, 2024)

Unleashing the Power of Prompt-Driven Nucleus Instance Segmentation. - Zhongyi Shui; Yunlong Zhang; Kai Yao; Chenglu Zhu; Sunyi Zheng; Jingxiong Li; Honglin Li 001; Yuxuan Sun 002; Ruizhe Guo; Lin Yang 002 (ECCV (27), 2024)

HLS-FGVC: Hierarchical Label Semantics Enhanced Fine-Grained Visual Classification. - Shichuan Zhang; Sunyi Zheng; Zhongyi Shui; Lin Yang 002 (ICASSP, 2024)

WsiCaption: Multiple Instance Generation of Pathology Reports for Gigapixel Whole-Slide Images. - Pingyi Chen; Honglin Li 001; Chenglu Zhu; Sunyi Zheng; Zhongyi Shui; Lin Yang 002 (MICCAI (4), 2024)

PathUp: Patch-wise Timestep Tracking for Multi-class Large Pathology Image Synthesising Diffusion Model. - Jingxiong Li; Sunyi Zheng; Chenglu Zhu; Yuxuan Sun 002; Pingyi Chen; Zhongyi Shui; Yunlong Zhang; Honglin Li 001; Lin Yang 002 (ACM Multimedia, 2024)

Rethinking Transformer for Long Contextual Histopathology Whole Slide Image Analysis. - Honglin Li 001; Yunlong Zhang; Pingyi Chen; Zhongyi Shui; Chenglu Zhu; Lin Yang 002 (NeurIPS, 2024)

ADR: Attention Diversification Regularization for Mitigating Overfitting in Multiple Instance Learning based Whole Slide Image Classification. - Yunlong Zhang; Zhongyi Shui; Yunxuan Sun; Honglin Li 001; Jingxiong Li; Chenglu Zhu; Sunyi Zheng; Lin Yang 002 (CoRR, 2024)

PathGen-1.6M: 1.6 Million Pathology Image-text Pairs Generation through Multi-agent Collaboration. - Yuxuan Sun 002; Yunlong Zhang; Yixuan Si; Chenglu Zhu; Zhongyi Shui; Kai Zhang 033; Jingxiong Li; Xingheng Lyu; Tao Lin 004; Lin Yang 002 (CoRR, 2024)

Large-scale cervical precancerous screening via AI-assisted cytology whole slide image analysis. - Honglin Li 001; Yuxuan Sun 002; Chenglu Zhu; Yunlong Zhang; Shichuan Zhang; Zhongyi Shui; Pingyi Chen; Jingxiong Li; Sunyi Zheng; Can Cui; Lin Yang 002 (CoRR, 2024)

Masked Conditional Variational Autoencoders for Chromosome Straightening. - Jingxiong Li; Sunyi Zheng; Zhongyi Shui; Shichuan Zhang; Linyi Yang; Yuxuan Sun 002; Yunlong Zhang; Honglin Li 001; Yuanxin Ye; Peter M. A. van Ooijen; Kang Li 004; Lin Yang 002 (IEEE Trans. Medical Imaging, 2024)

CPath-Omni: A Unified Multimodal Foundation Model for Patch and Whole Slide Image Analysis in Computational Pathology. - Yuxuan Sun 002; Yixuan Si; Chenglu Zhu; Xuan Gong; Kai Zhang 033; Pingyi Chen; Ye Zhang; Zhongyi Shui; Tao Lin 004; Lin Yang 002 (CVPR, 2025)

Stable Test-Time Training for Semantic Segmentation with Output Contrastive Loss. - Yunlong Zhang; Zhongyi Shui; Honglin Li 001; Yuxuan Sun 002; Chenglu Zhu; Lin Yang 002 (ICASSP, 2025)

Large-scale and Fine-grained Vision-language Pre-training for Enhanced CT Image Understanding. - Zhongyi Shui; Jianpeng Zhang; Weiwei Cao; Sinuo Wang; Ruizhe Guo; Le Lu 001; Lin Yang 002; Xianghua Ye; Tingbo Liang; Qi Zhang; Ling Zhang 002 (ICLR, 2025)

PathGen-1.6M: 1.6 Million Pathology Image-text Pairs Generation through Multi-agent Collaboration. - Yuxuan Sun 002; Yunlong Zhang; Yixuan Si; Chenglu Zhu; Kai Zhang 033; Zhongyi Shui; Jingxiong Li; Xuan Gong; Xinheng Lyu; Tao Lin 004; Lin Yang 002 (ICLR, 2025)

Towards Effective and Efficient Context-aware Nucleus Detection in Histopathology Whole Slide Images. - Zhongyi Shui; Ruizhe Guo; Honglin Li 001; Yuxuan Sun 002; Yunlong Zhang; Chenglu Zhu; Jiatong Cai; Pingyi Chen; Yanzhou Su; Lin Yang 002 (CoRR, 2025)

PathVQ: Reforming Computational Pathology Foundation Model for Whole Slide Image Analysis via Vector Quantization. - Honglin Li 001; Zhongyi Shui; Yunlong Zhang; Chenglu Zhu; Lin Yang 002 (CoRR, 2025)

CPathAgent: An Agent-based Foundation Model for Interpretable High-Resolution Pathology Image Analysis Mimicking Pathologists' Diagnostic Logic. - Yuxuan Sun 002; Yixuan Si; Chenglu Zhu; Kai Zhang 033; Zhongyi Shui; Bowen Ding; Tao Lin 004; Lin Yang 002 (CoRR, 2025)