Modeling of the Atomic Diffusion Coefficient in Nanostructured Materials. - Zhiqing Hu; Zhuo Li; Kai Tang; Zi Wen; Yongfu Zhu (Entropy, 2018)

CharID: a two-step model for universal prediction of interactions between chromatin accessible regions. - Yin Shen; Quan Zhong; Tian Liu; Zi Wen; Wei Shen; Li Li 057 (Briefings Bioinform., 2022)

iEnhance: a multi-scale spatial projection encoding network for enhancing chromatin interaction data resolution. - Kai Li; Ping Zhang 027; Zilin Wang; Wei Shen; Weicheng Sun; Jinsheng Xu; Zi Wen; Li Li 057 (Briefings Bioinform., 2023)

COCOA: A Framework for Fine-scale Mapping of Cell-type-specific Chromatin Compartments Using Epigenomic Information. - Kai Li; Ping Zhang 027; Jinsheng Xu; Zi Wen; Junying Zhang; Zhike Zi; Li Li 057 (Genom. Proteom. Bioinform., 2025)