Linear quadratic Nash game-based tracker for multiparameter singularly perturbed sampled-data systems: digital redesign approach. - Jason Sheng-Hong Tsai; Zi-Yi Yang; Shu-Mei Guo; Leang-San Shieh; Chia-Wei Chen (Int. J. Gen. Syst., 2007)

Personality as a metric for topic models on social networks. - Zi-Yi Yang; Jun Sang; Daxiang Hong; Tong Wang; Zhili Xiang (J. High Speed Networks, 2016)

Structural Analysis and Identification of Colloidal Aggregators in Drug Discovery. - Zi-Yi Yang; Zhi-Jiang Yang; Jie Dong; Liang-Liang Wang; Liu-Xia Zhang; Jun-Jie Ding; Xiao-Qin Ding; Ai-Ping Lu; Tingjun Hou; Dong-Sheng Cao 001 (J. Chem. Inf. Model., 2019)

Structural Analysis and Identification of False Positive Hits in Luciferase-Based Assays. - Zi-Yi Yang; Jie Dong; Zhi-Jiang Yang; Ai-Ping Lu; Tingjun Hou; Dong-Sheng Cao 001 (J. Chem. Inf. Model., 2020)

QSAR-assisted-MMPA to expand chemical transformation space for lead optimization. - Li Fu; Zi-Yi Yang; Zhi-Jiang Yang; Mingzhu Yin; Ai-Ping Lu; Xiang Chen; Shao Liu; Tingjun Hou; Dong-Sheng Cao 001 (Briefings Bioinform., 2021)

ChemFLuo: a web-server for structure analysis and identification of fluorescent compounds. - Zi-Yi Yang; Jie Dong; Zhi-Jiang Yang; Mingzhu Yin; Hong-Li Jiang; Ai-Ping Lu; Xiang Chen; Tingjun Hou; Dong-Sheng Cao 001 (Briefings Bioinform., 2021)

Scopy: an integrated negative design python library for desirable HTS/VS database design. - Zi-Yi Yang; Zhi-Jiang Yang; Ai-Ping Lu; Tingjun Hou; Dong-Sheng Cao 001 (Briefings Bioinform., 2021)

PySmash: Python package and individual executable program for representative substructure generation and application. - Zi-Yi Yang; Zhi-Jiang Yang; Yue Zhao; Mingzhu Yin; Ai-Ping Lu; Xiang Chen; Shao Liu; Tingjun Hou; Dong-Sheng Cao 001 (Briefings Bioinform., 2021)

Semi-automated workflow for molecular pair analysis and QSAR-assisted transformation space expansion. - Zi-Yi Yang; Li Fu; Ai-Ping Lu; Shao Liu; Tingjun Hou; Dong-Sheng Cao 001 (J. Cheminformatics, 2021)

SPLDExtraTrees: robust machine learning approach for predicting kinase inhibitor resistance. - Zi-Yi Yang; Zhaofeng Ye; Yijia Xiao; Chang-Yu Hsieh; Sheng-Yu Zhang (Briefings Bioinform., 2022)

Machine learning to predict metabolic drug interactions related to cytochrome P450 isozymes. - Ning-Ning Wang; Xiang-Gui Wang; Guo-Li Xiong; Zi-Yi Yang; Ai-Ping Lu; Xiang Chen; Shao Liu; Tingjun Hou; Dong-Sheng Cao 001 (J. Cheminformatics, 2022)

ChemMORT: an automatic ADMET optimization platform using deep learning and multi-objective particle swarm optimization. - Jiacai Yi; Zi-Yi Yang; Wen-Tao Zhao; Zhi-Jiang Yang; Xiao-Chen Zhang; Chengkun Wu; Ai-Ping Lu; Dong-Sheng Cao 001 (Briefings Bioinform., 2024)