MediSyn: uncertainty-aware visualization of multiple biomedical datasets to support drug treatment selection. - Chen He 003; Luana Micallef; ZiaurRehman Tanoli; Samuel Kaski; Tero Aittokallio; Giulio Jacucci (BMC Bioinform., 2017)

Drug Target Commons 2.0: a community platform for systematic analysis of drug-target interaction profiles. - ZiaurRehman Tanoli; Zaid Alam; Markus Vähä-Koskela; Balaguru Ravikumar; Alina Malyutina; Alok Jaiswal; Jing Tang 002; Krister Wennerberg; Tero Aittokallio (Database J. Biol. Databases Curation, 2018)

DrugComb: an integrative cancer drug combination data portal. - Bulat Zagidullin; Jehad Aldahdooh; Shuyu Zheng; Wenyu Wang; Yinyin Wang; Joseph Saad; Alina Malyutina; Mohieddin Jafari; ZiaurRehman Tanoli; Alberto Pessia; Jing Tang 002 (Nucleic Acids Res., 2019)

Interactive visual analysis of drug-target interaction networks using Drug Target Profiler, with applications to precision medicine and drug repurposing. - ZiaurRehman Tanoli; Zaid Alam; Aleksandr Ianevski; Krister Wennerberg; Markus Vähä-Koskela; Tero Aittokallio (Briefings Bioinform., 2020)

Exploration of databases and methods supporting drug repurposing: a comprehensive survey. - ZiaurRehman Tanoli; Umair Seemab; Andreas Scherer; Krister Wennerberg; Jing Tang 002; Markus Vähä-Koskela (Briefings Bioinform., 2021)

R-BERT-CNN: Drug-target interactions extraction from biomedical literature. - Jehad Aldahdooh; ZiaurRehman Tanoli; Jing Tang 002 (CoRR, 2021)

Minimal information for chemosensitivity assays (MICHA): a next-generation pipeline to enable the FAIRification of drug screening experiments. - ZiaurRehman Tanoli; Jehad Aldahdooh; Farhan Alam; Yinyin Wang; Umair Seemab; Maddalena Fratelli; Petr Pavlis; Marián Hajdúch; Florence Bietrix; Philip Gribbon; Andrea Zaliani; Matthew D. Hall; et al. (Briefings Bioinform., 2022)

Using BERT to identify drug-target interactions from whole PubMed. - Jehad Aldahdooh; Markus Vähä-Koskela; Jing Tang 002; ZiaurRehman Tanoli (BMC Bioinform., 2022)

SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug Combination Screening Datasets. - Shuyu Zheng; Wenyu Wang; Jehad Aldahdooh; Alina Malyutina; Tolou Shadbahr; ZiaurRehman Tanoli; Alberto Pessia; Jing Tang 002 (Genom. Proteom. Bioinform., 2022)

Breeze 2.0: an interactive web-tool for visual analysis and comparison of drug response data. - Potdar Swapnil; Filipp Ianevski; Aleksandr Ianevski; ZiaurRehman Tanoli; Krister Wennerberg; Brinton Seashore-Ludlow; Olli-P. Kallioniemi; Päivi Östling; Tero Aittokallio; Saarela Jani (Nucleic Acids Res., 2023)

RepurposeDrugs: an interactive web-portal and predictive platform for repurposing mono- and combination therapies. - Aleksandr Ianevski; Aleksandr Kushnir; Kristen Nader; Mitro Miihkinen; Henri Xhaard; Tero Aittokallio; ZiaurRehman Tanoli (Briefings Bioinform., 2024)