An approach to predict transcription factor DNA binding site specificity based upon gene and transcription factor functional categorization. - Ziliang Qian; Lingyi Lu; Xiao-Jun Liu; Yu-Dong Cai 001; Yixue Li (Bioinform., 2007)

ECS: An automatic enzyme classifier based on functional domain composition. - Lingyi Lu; Ziliang Qian; Yu-Dong Cai 001; Yixue Li (Comput. Biol. Chem., 2007)

The combination approach of SVM and ECOC for powerful identification and classification of transcription factor. - Guangyong Zheng; Ziliang Qian; Qing Yang; Chaochun Wei; Lu Xie; Yangyong Zhu; Yixue Li (BMC Bioinform., 2008)

Prediction of interactiveness between small molecules and enzymes by combining gene ontology and compound similarity. - Lei Chen 007; Ziliang Qian; Kaiyan Feng; Yudong Cai 001 (J. Comput. Chem., 2010)