Generating counterfactual explanations of tumor spatial proteomes to discover effective, combinatorial therapies that enhance cancer immunotherapy. - Zitong Jerry Wang; Matt Thomson 001 (CoRR, 2022)

A Supervised Contrastive Framework for Learning Disentangled Representations of Cellular Perturbation Data. - Xinming Tu; Jan-Christian Hütter; Zitong Jerry Wang; Takamasa Kudo; Aviv Regev; Romain Lopez (MLCB, 2023)

ViTally Consistent: Scaling Biological Representation Learning for Cell Microscopy. - Kian Kenyon-Dean; Zitong Jerry Wang; John Urbanik; Konstantin Donhauser; Jason S. Hartford; Saber Saberian; Nil Sahin; Ihab Bendidi; Safiye Celik; Marta M. Fay; Juan Sebastian Rodriguez Vera; Imran S. Haque; et al. (CoRR, 2024)

Predicting function of evolutionarily implausible DNA sequences. - Shiyu Jiang; Xuyin Liu; Zitong Jerry Wang (CoRR, 2025)