waveTM: Wavelet-based transmembrane segment prediction. - Evanthia E. Pashou; Zoi I. Litou; Theodore Liakopoulos; Stavros J. Hamodrakas (Silico Biol., 2004)

PRED-GPCR: GPCR recognition and family classification server. - Panagiotis K. Papasaikas; Pantelis G. Bagos; Zoi I. Litou; Vasilis J. Promponas; Stavros J. Hamodrakas (Nucleic Acids Res., 2004)

N-terminal sequence-based prediction of subcellular location. - Evangelia Petsalakis; Pantelis G. Bagos; Zoi I. Litou; Stavros J. Hamodrakas (BMC Bioinform., 2005)

PredSL: A Tool for the N-terminal Sequence-based Prediction of Protein Subcellular Localization. - Evangelia Petsalaki; Pantelis G. Bagos; Zoi I. Litou; Stavros J. Hamodrakas (Genom. Proteom. Bioinform., 2006)

Estimation of Membrane Proteins in the Human Proteome. - Mamoun Ahram; Zoi I. Litou; Ruihua Fang; Ghaith Al-Tawallbeh (Silico Biol., 2006)

Prediction of Cell Wall Sorting Signals in Gram-Positive bacteria with a Hidden Markov Model: Application to Complete genomes. - Zoi I. Litou; Pantelis G. Bagos; Konstantinos D. Tsirigos; Theodore D. Liakopoulos; Stavros J. Hamodrakas (J. Bioinform. Comput. Biol., 2008)

CW-PRED: A HMM-Based Method for the Classification of Cell Wall-Anchored Proteins of Gram-Positive Bacteria. - Danai K. Fimereli; Konstantinos D. Tsirigos; Zoi I. Litou; Theodore D. Liakopoulos; Pantelis G. Bagos; Stavros J. Hamodrakas (SETN, 2012)

JUCHMME: a Java Utility for Class Hidden Markov Models and Extensions for biological sequence analysis. - Ioannis A. Tamposis; Konstantinos D. Tsirigos; Margarita C. Theodoropoulou; Panagiota I. Kontou; Georgios N. Tsaousis; Dimitra Sarantopoulou; Zoi I. Litou; Pantelis G. Bagos (Bioinform., 2019)

CW-PRED: Prediction of C-terminal surface anchoring sorting signals in bacteria and Archaea. - Aikaterini G. Chatziargyri; Evangelia A. Stasi; Konstantinos D. Tsirigos; Zoi I. Litou; Vassiliki A. Iconomidou; Pantelis G. Bagos (J. Bioinform. Comput. Biol., 2024)