Identification of sequence-structure RNA binding motifs for SELEX-derived aptamers. - Jan Hoinka; Elena Zotenko; Adam Friedman; Zuben E. Sauna; Teresa M. Przytycka (Bioinform., 2012)

Polymorphisms in the F8 Gene and MHC-II Variants as Risk Factors for the Development of Inhibitory Anti-Factor VIII Antibodies during the Treatment of Hemophilia A: A Computational Assessment. - Gouri Shankar Pandey; Chen Yanover; Tom E. Howard; Zuben E. Sauna (PLoS Comput. Biol., 2013)

AptaCluster - A Method to Cluster HT-SELEX Aptamer Pools and Lessons from Its Application. - Jan Hoinka; Alexey Berezhnoy; Zuben E. Sauna; Eli Gilboa; Teresa M. Przytycka (RECOMB, 2014)

Mathematical model of a personalized neoantigen cancer vaccine and the human immune system. - Marisabel Rodriguez Messan; Osman N. Yogurtçu; Joseph R. McGill; Ujwani Nukala; Zuben E. Sauna; Hong Yang (PLoS Comput. Biol., 2021)

A Machine Learning Approach for Identifying HLA Variants Associated with Symptomatic and Asymptomatic COVID-19. - Atul Rawal; Rayam Jawa; Zuben E. Sauna (ICMLA, 2024)

Dose optimization of an adjuvanted peptide-based personalized neoantigen melanoma vaccine. - Wencel Valega-Mackenzie; Marisabel Rodriguez Messan; Osman N. Yogurtçu; Ujwani Nukala; Zuben E. Sauna; Hong Yang (PLoS Comput. Biol., 2024)