Iwijn De Vlaminck

According to our database, Iwijn De Vlaminck authored at least 38 papers between 2017 and 2024.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of three.

2024

Spatial Mapping of Mobile Genetic Elements and their Cognate Hosts in Complex Microbiomes - Identifying the host taxon of a previously undescribed plasmid.

Benjamin Grodner, Hao Shi, Owen Farchione, Albert C. Vill, Ioannis Ntekas, Peter J. Diebold, David T. Wu, Chia-Yu Chen, David M. Kim, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, April, 2024

Spatial Mapping of Mobile Genetic Elements and their Cognate Hosts in Complex Microbiomes - Combined MGE and taxonomic mapping.

Benjamin Grodner, Hao Shi, Owen Farchione, Albert C. Vill, Ioannis Ntekas, Peter J. Diebold, David T. Wu, Chia-Yu Chen, David M. Kim, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, April, 2024

2023

Spatial Mapping and Host Linking of Mobile Genetic Elements in Complex Microbiomes - Combined taxonomic mapping and MGE mapping.

Benjamin Grodner, Hao Shi, Owen Farchione, Albert C. Vill, Ioannis Ntekas, Peter J. Diebold, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, June, 2023

Spatial Mapping and Host Linking of Mobile Genetic Elements in Complex Microbiomes - Mapping MGEs in oral plaque biofilms at high specificity.

Benjamin Grodner, Hao Shi, Owen Farchione, Albert C. Vill, Ioannis Ntekas, Peter J. Diebold, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, June, 2023

Spatial Mapping and Host Linking of Mobile Genetic Elements in Complex Microbiomes - Visualizing phage infection.

Benjamin Grodner, Hao Shi, Owen Farchione, Albert C. Vill, Ioannis Ntekas, Peter J. Diebold, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, June, 2023

Spatial Mapping and Host Linking of Mobile Genetic Elements in Complex Microbiomes - Optimization of single molecule MGE FISH.

Benjamin Grodner, Hao Shi, Owen Farchione, Albert C. Vill, Ioannis Ntekas, Peter J. Diebold, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, June, 2023

2022

Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets.

Jia Zhao, Gefei Wang, Jingsi Ming, Zhixiang Lin, Yang Wang, Snigdha Agarwal, Aditi Agrawal, Ahmad Al-Moujahed, Alina Alam, Megan A. Albertelli, Paul Allegakoen, Thomas Ambrosi, Jane Antony, Steven Artandi, Fabienne Aujard, Kyle Awayan, Ankit Baghel, Isaac Bakerman, Trygve E. Bakken, Jalal Baruni, Philip Beachy, Biter Bilen, Olga B. Botvinnik, Scott D. Boyd, Deviana Burhan, Kerriann M. Casey, Charles Chan, Charles A. Chang, Stephen Chang, Ming Chen, Michael F. Clarke, Sheela Crasta, Rebecca Culver, Jessica D'Addabbo, Spyros Darmanis, Roozbeh Dehghannasiri, Song-Lin Ding, Connor V. Duffy, Jacques Epelbaum, F. Hernán Espinoza, Camille Ezran, Jean Farup, James E. Ferrell Jr, Hannah K. Frank, Margaret Fuller, Astrid Gillich, Elias Godoy, Dita Gratzinger, Lisbeth A. Guethlein, Yan Hang, Kazuteru Hasegawa, Rebecca D. Hodge, Malachia Hoover, Franklin W. Huang, Kerwyn Casey Huang, Shelly Huynh, Taichi Isobe, Carly Israel, Sori Jang, Qiuyu Jing, Robert C. Jones, Jengmin Kang, Caitlin J. Karanewsky, Jim Karkanias, Justus Kebschull, Aaron Kershner, Lily Kim, Seung K. Kim, E. Christopher Kirk, Winston Koh, Silvana Konermann, William Kong, Mark A. Krasnow, Christin Kuo, Corinne Lautier, Song Eun Lee, Ed S. Lein, Rebecca Lewis, Peng Li, Shengda Lin, Shixuan Liu, Yin Liu, Gabriel Loeb, Jonathan Z. Long, Wan-Jin Lu, Katherine Lucot, Liqun Luo, Aaron McGeever, Ross Metzger, Jingsi Ming, Thomas J. Montine, Antoine de Morree, Maurizio Morri, Karim Mrouj, Shravani Mukherjee, Ahmad Nabhan, Saba Nafees, Norma Neff, Patrick Neuhöfer, Patricia Nguyen, Jennifer Okamoto, Julia Eve Olivieri, Youcef Ouadah, Honor Paine, Peter Parham, Jozeph L. Pendleton, Lolita Penland, Martine Perret, Angela Oliveira Pisco, Zhen Qi, Stephen R. Quake, Ute Radespiel, Thomas A. Rando, Hajanirina Noëline Ravelonjanahary, Andriamahery Razafindrakoto, Julia Salzman, Nicholas Schaum, Robert Schopler, Bronwyn Scott, Liza Shapiro, Hosu Sin, Rahul Sinha, Rene Sit, Geoff Stanley, Lubert Stryer, Varun Ramanan Subramaniam, Aditi Swarup, Weilun Tan, Alexander Tarashansky, Aris Taychameekiatchai, Jérémy Terrien, Kyle J. Travaglini, Andoni Urtasun, Sivakamasundari, Avin Veerakumar, Venkata Naga Pranathi Vemuri, Jean-Michel Verdier, Iwijn De Vlaminck, Douglas Vollrath, Bo Wang, Bruce Wang, Gefei Wang, Michael F. Z. Wang, Sheng Wang, James Webber, Hannah Weinstein, Irving L. Weissman, Amanda L. Wiggenhorn, Cathy V. Williams, Patricia Wright, Albert Y. Wu, Angela Ruohao Wu, Tony Wyss-Coray, Bao Xiang, Jia Yan, Can Yang, Jinxurong Yang, Anne D. Yoder, Brian Yu, Andrea R. Yung, Yue Zhang, Jia Zhao, Zicheng Zhao

Nat. Comput. Sci., 2022

2020

HiPR-FISH Oral Microbiome Experiments 5.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2020

2019

HiPR-FISH Mouse Gut Microbiome Experiments 4.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 10.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 9.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 8.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 7.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 6.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 3.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 2.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 1.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Oral Microbiome Experiments 4.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Oral Microbiome Experiments 3.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Oral Microbiome Experiments 2.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Oral Microbiome Experiments 1.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Multispecies Experiment.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH 1023 Mix Experiment.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E. coli Titration Experiment Mix 7.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E.coli Titration Experiment Mix 6.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E. coli Titration Experiment Mix 5.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E. coli Titration Experiment Mix 4.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E. coli Titration Experiment Mix 3.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E. coli Titration Experiment Mix 2.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E. coli Titration Experiment Mix 1.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH E. coli Titration Experiment Mix 0.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH 10-bit Experiment Barcode 768 - 1023.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH 10-bit Experiment Barcode 512 - 767.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH PacBio Sequencing Data.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH Mouse Gut Microbiome Experiments 5.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH 10-bit Experiment Barcode 256 - 511.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

HiPR-FISH 10-bit Experiment Barcode 1 - 255.

Hao Shi, Qiaojuan Shi, Benjamin Grodner, Joan Sesing Lenz, Warren Zipfel, Ilana L. Brito, Iwijn De Vlaminck

Dataset, September, 2019

2017

Quantification of transplant-derived circulating cell-free DNA in absence of a donor genotype.

Eilon Sharon, Hao Shi, Sandhya Kharbanda, Winston Koh, Lance R. Martin, Kiran K. Khush, Hannah A. Valantine, Jonathan K. Pritchard, Iwijn De Vlaminck

PLoS Comput. Biol., 2017