James Shiniti Nagai

According to our database, James Shiniti Nagai authored at least 4 papers between 2018 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Advances and challenges in cell-cell communication inference: a comprehensive review of tools, resources, and future directions.

Giulia Cesaro, James Shiniti Nagai, Nicolò Gnoato, Alice Chiodi, Gaia Tussardi, Vanessa Klöker, Carmelo Vittorio Musumarra, Ettore Mosca, Ivan G. Costa, Barbara Di Camillo, Enrica Calura, Giacomo Baruzzo

Briefings Bioinform., 2025

2024

Optimal Transport Distances for Directed, Weighted Graphs: A Case Study With Cell-Cell Communication Networks.

James Shiniti Nagai, Ivan G. Costa, Michael T. Schaub

Proceedings of the IEEE International Conference on Acoustics, 2024

2021

CrossTalkeR: analysis and visualization of ligand-receptorne tworks.

James Shiniti Nagai, Nils B. Leimkühler, Michael T. Schaub, Rebekka K. Schneider, Ivan G. Costa

Bioinform., November, 2021

2018

Gene Essentiality Prediction Using Topological Features From Metabolic Networks.

James Shiniti Nagai, Hério Sousa, Alexandre Hild Aono, Ana Carolina Lorena, Reginaldo Massanobu Kuroshu

Proceedings of the 7th Brazilian Conference on Intelligent Systems, 2018