Jia Meng

According to our database, Jia Meng authored at least 82 papers between 2004 and 2024.

Collaborative distances:

• Dijkstra number of three.
• Erdős number of four.

2024

Tissue-specific RNA methylation prediction from gene expression data using sparse regression models.

Jie Jiang, Bowen Song, Jia Meng, Jingxian Zhou

Comput. Biol. Medicine, February, 2024

Low-level wind shear of wind field modelling and simulation.

Zhang Ye, Jia Meng

Int. J. Wirel. Mob. Comput., 2024

2023

SonarGuard: Ultrasonic Face Liveness Detection on Mobile Devices.

Dongheng Zhang, Jia Meng, Jian Zhang, Xinzhe Deng, Shouhong Ding, Man Zhou, Qian Wang, Qi Li, Yan Chen

IEEE Trans. Circuits Syst. Video Technol., August, 2023

m6A-TSHub: Unveiling the Context-specific m⁶A Methylation and m⁶A-affecting Mutations in 23 Human Tissues.

Bowen Song, Daiyun Huang, Yuxin Zhang, Zhen Wei, Jionglong Su, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng, Kunqi Chen

Genom. Proteom. Bioinform., August, 2023

Gradient adaptive sampling and multiple temporal scale 3D CNNs for tactile object recognition.

Xiaoliang Qian, Jia Meng, Wei Wang, Liying Jiang

Frontiers Neurorobotics, June, 2023

Multi-task adaptive pooling enabled synergetic learning of RNA modification across tissue, type and species from low-resolution epitranscriptomes.

Yiyou Song, Yue Wang, Xuan Wang, Daiyun Huang, Anh Nguyen, Jia Meng

Briefings Bioinform., May, 2023

DirectRMDB: a database of post-transcriptional RNA modifications unveiled from direct RNA sequencing technology.

Yuxin Zhang, Jie Jiang, Jiongming Ma, Zhen Wei, Yue Wang, Bowen Song, Jia Meng, Guifang Jia, João Pedro de Magalhães, Daniel J. Rigden, Daiyun Hang, Kunqi Chen

Nucleic Acids Res., January, 2023

RMDisease V2.0: an updated database of genetic variants that affect RNA modifications with disease and trait implication.

Bowen Song, Xuan Wang, Zhanmin Liang, Jiongming Ma, Daiyun Huang, Yue Wang, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng, Gang Liu, Kunqi Chen, Zhen Wei

Nucleic Acids Res., January, 2023

Study of adaptive clutter suppression method used for airborne forward-looking wind shear radar.

Jia Meng, Zhang Ye

Int. J. Wirel. Mob. Comput., 2023

A Robust Framework of Chromosome Straightening With Vit-Patch Gan.

Sifan Song, Jinfeng Wang, Fengrui Cheng, Qirui Cao, Yihan Zuo, Yongteng Lei, Ruomai Yang, Chunxiao Yang, Frans Coenen, Jia Meng, Kang Dang, Jionglong Su

Proceedings of the 20th IEEE International Symposium on Biomedical Imaging, 2023

Self-Paced Partial Domain-Aware Learning for Face Anti-Spoofing.

Zhiyi Chen, Yao Lu, Xinzhe Deng, Jia Meng, Shengchuan Zhang, Liujuan Cao

Proceedings of the IEEE International Conference on Acoustics, 2023

2022

FBCwPlaid: A Functional Biclustering Analysis of Epi-Transcriptome Profiling Data Via a Weighted Plaid Model.

Shutao Chen, Lin Zhang, Lin Lu, Jia Meng, Hui Liu

IEEE ACM Trans. Comput. Biol. Bioinform., 2022

A New Convolutional Neural Network Architecture for Automatic Segmentation of Overlapping Human Chromosomes.

Sifan Song, Tianming Bai, Yanxin Zhao, Wenbo Zhang, Chunxiao Yang, Jia Meng, Fei Ma, Jionglong Su

Neural Process. Lett., 2022

m5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome.

Jiongming Ma, Bowen Song, Zhen Wei, Daiyun Huang, Yuxin Zhang, Jionglong Su, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng, Kunqi Chen

Nucleic Acids Res., 2022

Stepwise Feature Fusion: Local Guides Global.

Jinfeng Wang, Qiming Huang, Feilong Tang, Jia Meng, Jionglong Su, Sifan Song

Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2022, 2022

2021

Funm6AViewer: a web server and R package for functional analysis of context-specific m6A RNA methylation.

Song-Yao Zhang, Shaowu Zhang, Yujiao Tang, Xiaonan Fan, Jia Meng

Bioinform., November, 2021

m6A-Atlas: a comprehensive knowledgebase for unraveling the N6-methyladenosine (m6A) epitranscriptome.

Yujiao Tang, Kunqi Chen, Bowen Song, Jiongming Ma, Xiangyu Wu, Qingru Xu, Zhen Wei, Jionglong Su, Gang Liu, Rong Rong, Zhiliang Lu, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng

Nucleic Acids Res., 2021

RMDisease: a database of genetic variants that affect RNA modifications, with implications for epitranscriptome pathogenesis.

Kunqi Chen, Bowen Song, Yujiao Tang, Zhen Wei, Qingru Xu, Jionglong Su, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng

Nucleic Acids Res., 2021

A Novel Application of Image-to-Image Translation: Chromosome Straightening Framework by Learning from a Single Image.

Sifan Song, Daiyun Huang, Yalun Hu, Chunxiao Yang, Jia Meng, Fei Ma, Jiaming Zhang, Jionglong Su

CoRR, 2021

Aurora Guard: Reliable Face Anti-Spoofing via Mobile Lighting System.

Jian Zhang, Ying Tai, Taiping Yao, Jia Meng, Shouhong Ding, Chengjie Wang, Jilin Li, Feiyue Huang, Rongrong Ji

CoRR, 2021

MetaTX: deciphering the distribution of mRNA-related features in the presence of isoform ambiguity, with applications in epitranscriptome analysis.

Yue Wang, Kunqi Chen, Zhen Wei, Frans Coenen, Jionglong Su, Jia Meng

Bioinform., 2021

Weakly supervised learning of RNA modifications from low-resolution epitranscriptome data.

Daiyun Huang, Bowen Song, Jingjue Wei, Jionglong Su, Frans Coenen, Jia Meng

Bioinform., 2021

ConsRM: collection and large-scale prediction of the evolutionarily conserved RNA methylation sites, with implications for the functional epitranscriptome.

Bowen Song, Kunqi Chen, Yujiao Tang, Zhen Wei, Jionglong Su, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng

Briefings Bioinform., 2021

A Meta-analysis: Evaluating the Effect of METTL3/METTL14 on m6A Level Based on Knockdown Samples.

Yuxin Zhang, Yuxuan Wu, Di Zhen, Kunqi Chen, Jia Meng

Proceedings of the BIBE 2021: The Fifth International Conference on Biological Information and Biomedical Engineering, 2021

Computational Prediction of N6-methyladenosine (m6A) RNA Methylation in SARS-CoV-2 Viral Transcripts.

Qingru Xu, Xiangyu Wu, Jia Meng

Proceedings of the BIBE 2021: The Fifth International Conference on Biological Information and Biomedical Engineering, 2021

Prediction of m6A Reader Substrate Sites Using Deep Convolutional and Recurrent Neural Network.

Yuxuan Wu, Yuxin Zhang, Ruoqi Wang, Jia Meng, Kunqi Chen, Yiyou Song, Daiyun Huang

Proceedings of the BIBE 2021: The Fifth International Conference on Biological Information and Biomedical Engineering, 2021

2020

REW-ISA: unveiling local functional blocks in epi-transcriptome profiling data via an RNA expression-weighted iterative signature algorithm.

Lin Zhang, Shutao Chen, Jingyi Zhu, Jia Meng, Hui Liu

BMC Bioinform., 2020

m7GHub: deciphering the location, regulation and pathogenesis of internal mRNA N7-methylguanosine (m7G) sites in human.

Bowen Song, Yujiao Tang, Kunqi Chen, Zhen Wei, Rong Rong, Zhiliang Lu, Jionglong Su, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng

Bioinform., 2020

ISGm1A: Integration of Sequence Features and Genomic Features to Improve the Prediction of Human m₁A RNA Methylation Sites.

Lian Liu, Xiujuan Lei, Jia Meng, Zhen Wei

IEEE Access, 2020

Gibbs Sampling Based Banoian Biclustering of Gene Expression Data.

Daoyuan Chen, Qinyi Liu, Jia Meng, Jionglong Su

Proceedings of the 13th International Congress on Image and Signal Processing, 2020

An Improved Algorithm for Estimating the Distribution of RNA-related Genomic Features.

Jinge Wu, Lihan Zhang, Yuanzhe Wang, Jia Meng, Jionglong Su, Yue Wang

Proceedings of the BIBE 2020: The Fourth International Conference on Biological Information and Biomedical Engineering, 2020

2019

Global analysis of N6-methyladenosine functions and its disease association using deep learning and network-based methods.

Song-Yao Zhang, Shaowu Zhang, Xiaonan Fan, Jia Meng, Yidong Chen, Shou-Jiang Gao, Yufei Huang

PLoS Comput. Biol., 2019

m6Acomet: large-scale functional prediction of individual m6A RNA methylation sites from an RNA co-methylation network.

Xiangyu Wu, Zhen Wei, Kunqi Chen, Qing Zhang, Jionglong Su, Hui Liu, Lin Zhang, Jia Meng

BMC Bioinform., 2019

FunDMDeep-m6A: identification and prioritization of functional differential m6A methylation genes.

Song-Yao Zhang, Shao-Wu Zhang, Xiao-Nan Fan, Teng Zhang, Jia Meng, Yufei Huang

Bioinform., 2019

RNA methylation and diseases: experimental results, databases, Web servers and computational models.

Xing Chen, Ya-Zhou Sun, Hui Liu, Lin Zhang, Jian-Qiang Li, Jia Meng

Briefings Bioinform., 2019

Detection of m6A RNA Methylation in Nanopore Sequencing Data Using Support Vector Machine.

Shen Jia, Haochen Luo, Qiheng Gao, Jiaqi Guo, Jionglong Su, Jia Meng, Xiangyu Wu

Proceedings of the 12th International Congress on Image and Signal Processing, 2019

2018

MeTDiff: A Novel Differential RNA Methylation Analysis for MeRIP-Seq Data.

Xiaodong Cui, Lin Zhang, Jia Meng, Manjeet K. Rao, Yidong Chen, Yufei Huang

IEEE ACM Trans. Comput. Biol. Bioinform., 2018

MeT-DB V2.0: elucidating context-specific functions of N6-methyl-adenosine methyltranscriptome.

Hui Liu, Huaizhi Wang, Zhen Wei, Songyao Zhang, Gang Hua, Shao-Wu Zhang, Lin Zhang, Shou-Jiang Gao, Jia Meng, Xing Chen, Yufei Huang

Nucleic Acids Res., 2018

trumpet: transcriptome-guided quality assessment of m6A-seq data.

Teng Zhang, Shao-Wu Zhang, Lin Zhang, Jia Meng

BMC Bioinform., 2018

A Machine Learning Approach for Uncovering N6-methyladenosine-Disease Association.

Songyao Zhang, Shaowu Zhang, Xiaonan Fan, Jia Meng, Yidong Chen, Yufei Huang

Proceedings of the 2018 ACM International Conference on Bioinformatics, 2018

2017

Cancer Progression Prediction Using Gene Interaction Regularized Elastic Net.

Lin Zhang, Hui Liu, Yufei Huang, Xuesong Wang, Yidong Chen, Jia Meng

IEEE ACM Trans. Comput. Biol. Bioinform., 2017

QNB: differential RNA methylation analysis for count-based small-sample sequencing data with a quad-negative binomial model.

Lian Liu, Shao-Wu Zhang, Yufei Huang, Jia Meng

BMC Bioinform., 2017

Linguistic-valued lattice implication algebra TOPSIS method based on entropy weight method.

Hongdong Wang, Jia Meng, Li Zou, Siyuan Luo, Yuanyuan Shi

Proceedings of the 12th International Conference on Intelligent Systems and Knowledge Engineering, 2017

A Topology-Adaptive Strategy for Graph Traversing.

Jia Meng, Liang Cao, Huashan Yu

Proceedings of the 2017 International Conference on High Performance Computing & Simulation, 2017

Linguistic Truth-Valued Multi-Attribute Decision Making Approach Based on TOPSIS.

Yuanyuan Shi, Li Zou, Yingying Xu, Siyuan Luo, Jia Meng

Proceedings of the Intelligent Data Engineering and Automated Learning - IDEAL 2017 - 18th International Conference, Guilin, China, October 30, 2017

A Topology-Aware Framework for Graph Traversals.

Jia Meng, Liang Cao, Huashan Yu

Proceedings of the Algorithms and Architectures for Parallel Processing, 2017

2016

m6A-Driver: Identifying Context-Specific mRNA m6A Methylation-Driven Gene Interaction Networks.

Song-Yao Zhang, Shao-Wu Zhang, Lian Liu, Jia Meng, Yufei Huang

PLoS Comput. Biol., 2016

A novel algorithm for calling mRNA m⁶A peaks by modeling biological variances in MeRIP-seq data.

Xiaodong Cui, Jia Meng, Shaowu Zhang, Yidong Chen, Yufei Huang

Bioinform., 2016

A resolution method for linguistic truth-valued intuitionistic fuzzy first-order logic.

Lin Xiao, Jia Meng, Shifei Ding, Li Zou

Proceedings of the 2016 IEEE International Conference on Fuzzy Systems, 2016

2015

MeT-DB: a database of transcriptome methylation in mammalian cells.

Hui Liu, Mario A. Flores, Jia Meng, Lin Zhang, Xinyu Zhao, Manjeet K. Rao, Yidong Chen, Yufei Huang

Nucleic Acids Res., 2015

Modeling of replicates variances for detecting RNA methylation site in MERIP-SEQ data.

Xiaodong Cui, Jia Meng, Shaowu Zhang, Yufei Huang

Proceedings of the IEEE China Summit and International Conference on Signal and Information Processing, 2015

Sketching the distribution of transcriptomic features on RNA transcripts with Travis coordinates.

Xiaodong Cui, Zhen Wei, Lin Zhang, Hui Liu, Lei Sun, Shaowu Zhang, Yufei Huang, Jia Meng

Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015

2014

Classification of Imperfectly Time-Locked Image RSVP Events with EEG Device.

Jia Meng, Lenis Mauricio Merino, Kay Robbins, Yufei Huang

Neuroinformatics, 2014

Differential analysis of RNA methylome with improved spatial resolution.

Yu-Chen Zhang, Shao-Wu Zhang, Lian Liu, Lin Zhang, Hui Liu, Xiaodong Cui, Yufei Huang, Jia Meng

Proceedings of the 2014 IEEE Global Conference on Signal and Information Processing, 2014

Detecting differentially methylated mRNA from MeRIP-Seq with likelihood ratio test.

Lin Zhang, Jia Meng, Hui Liu, Xiaodong Cui, Shao-Wu Zhang, Yidong Chen, Yufei Huang

Proceedings of the 2014 IEEE Global Conference on Signal and Information Processing, 2014

2013

Exome-based analysis for RNA epigenome sequencing data.

Jia Meng, Xiaodong Cui, Manjeet K. Rao, Yidong Chen, Yufei Huang

Bioinform., 2013

A Dual-Antenna and Mobile Relay Station Based Handover in Distributed Antenna System for High-Speed Railway.

Xingyu Qian, Hao Wu, Jia Meng

Proceedings of the Seventh International Conference on Innovative Mobile and Internet Services in Ubiquitous Computing, 2013

An Adaptive Strategy for Location-Aided Routing Protocol in Vehicular Ad Hoc Networks.

Jia Meng, Hao Wu, Hengliang Tang, Xingyu Qian

Proceedings of the Seventh International Conference on Innovative Mobile and Internet Services in Ubiquitous Computing, 2013

A bag-of-words model for task-load prediction from EEG in complex environments.

Lenis Mauricio Merino, Jia Meng, Stephen M. Gordon, Brent J. Lance, Tony Johnson, Victor Paul, Kay Robbins, Jean M. Vettel, Yufei Huang

Proceedings of the IEEE International Conference on Acoustics, 2013

Differential analysis of rna methylation sequencing data.

Xiaodong Cui, Jia Meng, Manjeet K. Rao, Yidong Chen, Yufei Huang

Proceedings of the IEEE Global Conference on Signal and Information Processing, 2013

A Deep Learning method for classification of images RSVP events with EEG data.

Shaheen Ahmed, Lenis Mauricio Merino, Zijing Mao, Jia Meng, Kay Robbins, Yufei Huang

Proceedings of the IEEE Global Conference on Signal and Information Processing, 2013

An HMM-based Exome Peak-finding package for RNA epigenome sequencing data.

Xiaodong Cui, Jia Meng, Manjeet K. Rao, Yidong Chen, Yufei Huang

Proceedings of the 2013 IEEE International Workshop on Genomic Signal Processing and Statistics, 2013

Integration of gene expression, genome wide DNA methylation, and gene networks for clinical outcome prediction in ovarian cancer.

Lin Zhang, Hui Liu, Jia Meng, Xuesong Wang, Yidong Chen, Yufei Huang

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

Unveiling the dynamics in RNA epigenetic regulations.

Jia Meng, Xiaodong Cui, Hui Liu, Lin Zhang, Shaowu Zhang, Manjeet K. Rao, Yidong Chen, Yufei Huang

Proceedings of the 2013 IEEE International Conference on Bioinformatics and Biomedicine, 2013

2012

Understanding MicroRNA Regulation: A computational perspective.

Dong Yue, Jia Meng, Mingzhu Lu, C. L. Philip Chen, Maozu Guo, Yufei Huang

IEEE Signal Process. Mag., 2012

Basis-expansion factor models for uncovering transcription factor regulatory network.

Manuel Sanchez-Castillo, Jia Meng, Isabel M. Tienda-Luna, Yufei Huang

Proceedings of the IEEE Statistical Signal Processing Workshop, 2012

Exploiting correlated discriminant features in time frequency and space for characterization and robust classification of image RSVP events with EEG data.

Jia Meng, Lenis Mauricio Merino, Kay Robbins, Yufei Huang

Proceedings of the IEEE Statistical Signal Processing Workshop, 2012

Classification of EEG recordings without perfectly time-locked events.

Jia Meng, Lenis Mauricio Merino, Kay Robbins, Yufei Huang

Proceedings of the IEEE Statistical Signal Processing Workshop, 2012

2011

Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor model.

Jia Meng, Hung-I Chen, Jianqiu Zhang, Yidong Chen, Yufei Huang

Proceedings of the IEEE International Conference on Acoustics, 2011

Clustering DNA methylation expressions using nonparametric beta mixture model.

Lin Zhang, Jia Meng, Hui Liu, Yufei Huang

Proceedings of the 2011 IEEE International Workshop on Genomic Signal Processing and Statistics, 2011

2010

Uncovering Transcriptional Regulatory Networks by Sparse Bayesian Factor Model.

Jia Meng, Jianqiu (Michelle) Zhang, Yuan (Alan) Qi, Yidong Chen, Yufei Huang

EURASIP J. Adv. Signal Process., 2010

An iterated conditional mode solution for Bayesian factor modeling of transcriptional regulatory networks.

Jia Meng, Jianqiu Zhang, Yidong Chen, Yufei Huang

Proceedings of the 2010 IEEE International Workshop on Genomic Signal Processing and Statistics, 2010

An Iterated Conditional Modes solution for sparse Bayesian factor modeling of transcriptional regulatory networks.

Jia Meng, Jianqiu Zhang, Yidong Chen, Yufei Huang

Proceedings of the 2010 IEEE International Conference on Bioinformatics and Biomedicine, 2010

2009

Lightweight relevance filtering for machine-generated resolution problems.

Jia Meng, Lawrence C. Paulson

J. Appl. Log., 2009

Enrichment constrained time-dependent clustering analysis for finding meaningful temporal transcription modules.

Jia Meng, Shou-Jiang Gao, Yufei Huang

Bioinform., 2009

2008

Translating Higher-Order Clauses to First-Order Clauses.

Jia Meng, Lawrence C. Paulson

J. Autom. Reason., 2008

2007

A Termination Checker for Isabelle Hoare Logic.

Jia Meng, Lawrence C. Paulson, Gerwin Klein

Proceedings of 4th International Verification Workshop in connection with CADE-21, 2007

2006

Erratum to "Automation for interactive proof: First prototype" [Inform. and Comput. 204(2006) 1575-1596].

Jia Meng, Claire Quigley, Lawrence C. Paulson

Inf. Comput., 2006

Automation for interactive proof: First prototype.

Jia Meng, Claire Quigley, Lawrence C. Paulson

Inf. Comput., 2006

Geometric Resolution: A Proof Procedure Based on Finite Model Search.

Hans de Nivelle, Jia Meng

Proceedings of the Automated Reasoning, Third International Joint Conference, 2006

2005

The integration of higher order interactive proof with first order automatic theorem proving.

Jia Meng

PhD thesis, 2005

2004

Experiments on Supporting Interactive Proof Using Resolution.

Jia Meng, Lawrence C. Paulson

Proceedings of the Automated Reasoning - Second International Joint Conference, 2004