Jonathan P. Arnold
Orcid: 0000-0001-5845-1048
According to our database1,
Jonathan P. Arnold
authored at least 32 papers
between 1986 and 2022.
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Bibliography
2022
Ensemble Methods for Identifying RNA Operons and Regulons in the Clock Network of Neurospora Crassa.
IEEE Access, 2022
2020
RTExtract: time-series NMR spectra quantification based on 3D surface ridge tracking.
Bioinform., 2020
2019
Single cells of Neurospora crassa show circadian oscillations, light entrainment, temperature compensation, and phase synchronization.
Dataset, February, 2019
Single Cells of Neurospora Crassa Show Circadian Oscillations, Light Entrainment, Temperature Compensation, and Phase Synchronization.
IEEE Access, 2019
2018
Discovering Regulators in Post-Transcriptional Control of the Biological Clock of $Neurospora~crassa$ Using Variable Topology Ensemble Methods on GPUs.
IEEE Access, 2018
2015
BMC Bioinform., 2015
Discovering Regulatory Network Topologies Using Ensemble Methods on GPGPUs With Special Reference to the Biological Clock of Neurospora crassa.
IEEE Access, 2015
2013
Solving Nonlinear Systems of First Order Ordinary Differential Equations Using a Galerkin Finite Element Method.
IEEE Access, 2013
Solving Large Nonlinear Systems of First-Order Ordinary Differential Equations With Hierarchical Structure Using Multi-GPGPUs and an Adaptive Runge Kutta ODE Solver.
IEEE Access, 2013
2009
KINSOLVER: A simulator for computing large ensembles of biochemical and gene regulatory networks.
Comput. Math. Appl., 2009
2008
Likelihood of a Particular Order of Genetic Markers and the Construction of Genetic Maps.
J. Bioinform. Comput. Biol., 2008
2007
Design and Analysis of an Efficient Recursive Linking Algorithm for Constructing Likelihood Based Genetic Maps for a Large Number of Markers.
J. Bioinform. Comput. Biol., 2007
2004
2003
IntelliGEN: A Distributed Workflow System for Discovering Protein-Protein Interactions.
Distributed Parallel Databases, 2003
Proceedings of the 2nd IEEE Computer Society Bioinformatics Conference, 2003
2002
Proceedings of the 1st IEEE Computer Society Bioinformatics Conference, 2002
2001
2000
Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, 2000
Proceedings of the 14th International Parallel & Distributed Processing Symposium (IPDPS'00), 2000
1998
Parallel Comput., 1998
1996
Parallel Computing of Physical Maps--A Comparative Study in SIMD and MIMD Parallelism.
J. Comput. Biol., 1996
Comput. Appl. Biosci., 1996
1994
ODS_BOOTSTRAP: assessing the statistical reliability of physical maps by bootstrap resampling.
Comput. Appl. Biosci., 1994
1993
ODS: ordering DNA sequences - a physical mapping algorithm based on simulated annealing.
Comput. Appl. Biosci., 1993
PCAP: probe choice and analysis package - a set of programs to aid in choosing synthetic oligomers for contig mapping.
Comput. Appl. Biosci., 1993
Proceedings of the 1st International Conference on Intelligent Systems for Molecular Biology, 1993
A neural network model based on differential-algebraic equations for nonlinear programming.
Proceedings of International Conference on Neural Networks (ICNN'88), San Francisco, CA, USA, March 28, 1993
1992
CMAP: contig mapping and analysis package, a relational database for chromosome reconstruction.
Comput. Appl. Biosci., 1992
1988
1986
Nucleic Acids Res., 1986