Magdalena Wysocka

According to our database, Magdalena Wysocka authored at least 17 papers between 2022 and 2025.

Collaborative distances:

• Dijkstra number of five.
• Erdős number of four.

2025

Biomedical reasoning in action: Multi-agent System for Auditable Biomedical Evidence Synthesis.

Oskar Wysocki, Magdalena Wysocka, Mauricio Jacobo, Harriet Unsworth, André Freitas

CoRR, October, 2025

Accelerating Antibiotic Discovery with Large Language Models and Knowledge Graphs.

Maxime Delmas, Magdalena Wysocka, Danilo Miranda Gusicuma, André Freitas

CoRR, March, 2025

SylloBio-NLI: Evaluating Large Language Models on Biomedical Syllogistic Reasoning.

Magdalena Wysocka, Danilo S. Carvalho, Oskar Wysocki, Marco Valentino, André Freitas

Proceedings of the 2025 Conference of the Nations of the Americas Chapter of the Association for Computational Linguistics: Human Language Technologies, 2025

2024

Synthetic dataset for end-to-end Relation Extraction of relationships between Organisms and Natural-Products with Mixtral-8x7B-Instruct-v0.1.

Maxime Delmas, Magdalena Wysocka, André Freitas

Dataset, March, 2024

Large Language Models, scientific knowledge and factuality: A framework to streamline human expert evaluation.

Magdalena Wysocka, Oskar Wysocki, Maxime Delmas, Vincent Mutel, André Freitas

J. Biomed. Informatics, 2024

An LLM-based Knowledge Synthesis and Scientific Reasoning Framework for Biomedical Discovery.

Oskar Wysocki, Magdalena Wysocka, Danilo S. Carvalho, Alex Teodor Bogatu, Danilo Miranda Gusicuma, Maxime Delmas, Harriet Unsworth, André Freitas

CoRR, 2024

Relation Extraction in Underexplored Biomedical Domains: A Diversity-optimized Sampling and Synthetic Data Generation Approach.

Maxime Delmas, Magdalena Wysocka, André Freitas

Comput. Linguistics, 2024

2023

A systematic review of biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data.

Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas

BMC Bioinform., December, 2023

Synthetic dataset for end-to-end Relation Extraction of relationships between Organisms and Natural-Products with Vicuna-13b-v1.5.

Maxime Delmas, Magdalena Wysocka, André Freitas

Dataset, November, 2023

Evaluation dataset for Relation Extraction of relationships between Organisms and Natural-Products.

Magdalena Wysocka, Maxime Delmas, André Freitas

Dataset, October, 2023

Synthetic datasets for end-to-end Relation Extraction of relationships between Organisms and Natural-Products.

Maxime Delmas, Magdalena Wysocka, André Freitas

Dataset, October, 2023

Meta-analysis informed machine learning: Supporting cytokine storm detection during CAR-T cell Therapy.

Alex Bogatu, Magdalena Wysocka, Oskar Wysocki, Holly Butterworth, Manon Pillai, Jennifer Allison, Dónal Landers, Elaine Kilgour, Fiona Thistlethwaite, André Freitas

J. Biomed. Informatics, June, 2023

Transformers and the Representation of Biomedical Background Knowledge.

Oskar Wysocki, Zili Zhou, Paul O'Regan, Deborah Ferreira, Magdalena Wysocka, Dónal Landers, André Freitas

Comput. Linguistics, March, 2023

Relation Extraction in underexplored biomedical domains: A diversity-optimised sampling and synthetic data generation approach.

Maxime Delmas, Magdalena Wysocka, André Freitas

CoRR, 2023

Large Language Models, scientific knowledge and factuality: A systematic analysis in antibiotic discovery.

Magdalena Wysocka, Oskar Wysocki, Maxime Delmas, Vincent Mutel, André Freitas

CoRR, 2023

2022

Biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data.

Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas

CoRR, 2022

Metareview-informed Explainable Cytokine Storm Detection during CAR-T cell Therapy.

Alex Bogatu, Magdalena Wysocka, Oskar Wysocki, Holly Butterworth, Donal Landers, Elaine Kilgour, André Freitas

CoRR, 2022