Philip J. Freda

According to our database, Philip J. Freda authored at least 8 papers between 2022 and 2025.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of four.

2025

StarBASE-GP: Biologically-Guided Automated Machine Learning for Genotype-to-Phenotype Association Analysis.

Jose Guadalupe Hernandez, Attri Ghosh, Philip J. Freda, Yufei Meng, Nicholas Matsumoto, Jason H. Moore

CoRR, May, 2025

2024

Distinct network patterns emerge from Cartesian and XOR epistasis models: a comparative network science analysis.

Zhendong Sha, Philip J. Freda, Priyanka Bhandary, Attri Ghosh, Nicholas Matsumoto, Jason H. Moore, Ting Hu

BioData Min., 2024

Assessing the limitations of relief-based algorithms in detecting higher-order interactions.

Philip J. Freda, Suyu Ye, Robert Zhang, Jason H. Moore, Ryan J. Urbanowicz

BioData Min., 2024

PAGER: A novel genotype encoding strategy for modeling deviations from additivity in complex trait association studies.

Philip J. Freda, Attri Ghosh, Priyanka Bhandary, Nicholas Matsumoto, Apurva S. Chitre, Jiayan Zhou, Molly A. Hall, Abraham A. Palmer, Tayo Obafemi-Ajayi, Jason H. Moore

BioData Min., 2024

Interaction models matter: an efficient, flexible computational framework for model-specific investigation of epistasis.

Sandra Batista, Vered Madar, Philip J. Freda, Priyanka Bhandary, Attri Ghosh, Nicholas Matsumoto, Apurva S. Chitre, Abraham A. Palmer, Jason H. Moore

BioData Min., 2024

2023

Automated quantitative trait locus analysis (AutoQTL).

Philip J. Freda, Attri Ghosh, Elizabeth Zhang, Tianhao Luo, Apurva S. Chitre, Oksana Polesskaya, Celine L. St. Pierre, Jianjun Gao, Connor D. Martin, Hao Chen, Angel G. Garcia-Martinez, Tengfei Wang, Wenyan Han, Keita Ishiwari, Paul Meyer, Alexander Lamparelli, Christopher P. King, Abraham A. Palmer, Ruowang Li, Jason H. Moore

BioData Min., January, 2023

2022

Novel digital approaches to the assessment of problematic opioid use.

Philip J. Freda, Henry R. Kranzler, Jason H. Moore

BioData Min., 2022

Identifying Barriers to Post-Acute Care Referral and Characterizing Negative Patient Preferences Among Hospitalized Older Adults Using Natural Language Processing.

Erin E. Kennedy, Anahita Davoudi, Sy Hwang, Ryan J. Urbanowicz, Philip J. Freda, Kathryn H. Bowles, Danielle L. Mowery

Proceedings of the AMIA 2022, 2022